Antonino Fiannaca

Publication Activity (10 Years)

Years Active: 2006-2023
Publications (10 Years): 17

Top Topics

Genomic Sequences

Biological Data

Top Venues

Artif. Intell. Medicine

Publications

Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Salvatore Gaglio, Alfonso Urso
GOWDL: gene ontology-driven wide and deep learning model for cell typing of scRNA-seq data. Briefings Bioinform. 24 (6) (2023)
Gianmarco Coppola, Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Alfonso Urso, Salvatore Gaglio
A Gene Ontology-Driven Wide and Deep Learning Architecture for Cell-Type Classification from Single-Cell RNA-seq Data. EANN (2022)
Alfonso Urso, Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Giosuè Lo Bosco, Riccardo Rizzo
BITS2019: the sixteenth annual meeting of the Italian society of bioinformatics. BMC Bioinform. (8) (2020)
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
: extending miRTissue web service with the analysis of ceRNA-ceRNA interactions. BMC Bioinform. (8) (2020)
Valeria Boscaino, Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
MiRNA therapeutics based on logic circuits of biological pathways. BMC Bioinform. (9) (2019)
Paolo Romano, Arnaud Céol, Andreas Dräger, Antonino Fiannaca, Rosalba Giugno, Massimo La Rosa, Luciano Milanesi, Ulrich Pfeffer, Riccardo Rizzo, Soo-Yong Shin, Junfeng Xia, Alfonso Urso
The 2017 Network Tools and Applications in Biology (NETTAB) workshop: aims, topics and outcomes. BMC Bioinform. (4) (2019)
Giosuè Lo Bosco, Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
Variable Ranking Feature Selection for the Identification of Nucleosome Related Sequences. ADBIS (Short Papers and Workshops) (2018)
Antonio Messina, Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Alfonso Urso
BioGraph: a web application and a graph database for querying and analyzing bioinformatics resources. BMC Syst. Biol. 12 (5) (2018)
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Giosuè Lo Bosco, Giovanni Renda, Riccardo Rizzo, Salvatore Gaglio, Alfonso Urso
Deep learning models for bacteria taxonomic classification of metagenomic data. BMC Bioinform. (7) (2018)
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Giosuè Lo Bosco, Riccardo Rizzo, Alfonso Urso
Identification of Key miRNAs in Regulation of PPI Networks. CIBB (2018)
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Antonio Messina, Riccardo Rizzo, Dario Stabile, Alfonso Urso
Gremlin Language for Querying the BiographDB Integrated Biological Database. IWBBIO (1) (2017)
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Riccardo Rizzo, Alfonso Urso
nRC: non-coding RNA Classifier based on structural features. BioData Min. 10 (1) (2017)
Giosuè Lo Bosco, Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
A Deep Learning Model for Epigenomic Studies. SITIS (2016)
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Antonio Messina, Riccardo Rizzo, Alfonso Urso
A Problem-Driven Approach for Building a Bioinformatics GraphDB. CIBB (2016)
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Riccardo Rizzo, Alfonso Urso
MiRNATIP: a SOM-based miRNA-target interactions predictor. BMC Bioinform. 17 (S-11) (2016)
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Antonio Messina, Pietro Storniolo, Alfonso Urso
Integrated DB for Bioinformatics: A Case Study on Analysis of Functional Effect of MiRNA SNPs in Cancer. ITBAM (2016)
Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
Classification Experiments of DNA Sequences by Using a Deep Neural Network and Chaos Game Representation. CompSysTech (2016)
Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
A Deep Learning Approach to DNA Sequence Classification. CIBB (2015)
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Riccardo Rizzo, Alfonso Urso
Analysis of miRNA expression profiles in breast cancer using biclustering. BMC Bioinform. 16 (S-4) (2015)
Massimo La Rosa, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso
Probabilistic topic modeling for the analysis and classification of genomic sequences. BMC Bioinform. 16 (S-6) (2015)
Antonino Fiannaca, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
A k-mer-based barcode DNA classification methodology based on spectral representation and a neural gas network. Artif. Intell. Medicine 64 (3) (2015)
Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
The General Regression Neural Network to Classify Barcode and mini-barcode DNA. CIBB (2014)
Antonino Fiannaca, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
An expert system hybrid architecture to support experiment management. Expert Syst. Appl. 41 (4) (2014)
Antonino Fiannaca, Massimo La Rosa, Giuseppe Di Fatta, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
The BioDICE Taverna plugin for clustering and visualization of biological data: a workflow for molecular compounds exploration. J. Cheminformatics 6 (1) (2014)
Antonino Fiannaca, Massimo La Rosa, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
Knowledge organization for modelling workflows in Taverna environment. MED (2014)
Antonino Fiannaca, Massimo La Rosa, Alfonso Urso, Riccardo Rizzo, Salvatore Gaglio
A knowledge-based decision support system in bioinformatics: an application to protein complex extraction. BMC Bioinform. 14 (S-1) (2013)
Antonino Fiannaca, Giuseppe Di Fatta, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
Simulated annealing technique for fast learning of SOM networks. Neural Comput. Appl. 22 (5) (2013)
Antonino Fiannaca, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
Analysis of DNA Barcode Sequences Using Neural Gas and Spectral Representation. EANN (2) (2013)
Massimo La Rosa, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso
Genomic Sequence Classification Using Probabilistic Topic Modeling. CIBB (2013)
Massimo La Rosa, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso
Alignment-free analysis of barcode sequences by means of compression-based methods. BMC Bioinform. 14 (S-7) (2013)
Massimo La Rosa, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso
A Study of Compression-Based Methods for the Analysis of Barcode Sequences. CIBB (2012)
Antonino Fiannaca, Salvatore Gaglio, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
An Intelligent System for Building Bioinformatics Workflows. CISIS (2012)
Antonino Fiannaca, Massimo La Rosa, Salvatore Gaglio
An ontology design methodology for Knowledge-Based systems with application to bioinformatics. CIBCB (2012)
Antonino Fiannaca, Massimo La Rosa, Daniele Peri, Riccardo Rizzo
An Intelligent System for Decision Support in Bioinformatics. ERCIM News 2011 (84) (2011)
Antonino Fiannaca, Salvatore Gaglio, Massimo La Rosa, Daniele Peri, Riccardo Rizzo, Alfonso Urso
A Knowledge Based Decision Support System for Bioinformatics and System Biology. CIBB (2010)
Antonino Fiannaca, Salvatore Gaglio, Massimo La Rosa, Daniele Peri, Riccardo Rizzo, Alfonso Urso
A Proposed Knowledge Based Approach for Solving Proteomics Issues. CIBB (2009)
Antonino Fiannaca, Giuseppe Di Fatta, Alfonso Urso, Riccardo Rizzo, Salvatore Gaglio
A New Linear Initialization in SOM for Biomolecular Data. CIBB (2008)
Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
A New SOM Initialization Algorithm for Nonvectorial Data. KES (1) (2008)
Antonino Fiannaca, Giuseppe Di Fatta, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
Clustering Quality and Topology Preservation in Fast Learning SOMs. ICANN (1) (2008)
Antonino Fiannaca, Giuseppe Di Fatta, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
Fast Training of Self Organizing Maps for the Visual Exploration of Molecular Compounds. IJCNN (2007)
Antonino Fiannaca, Giuseppe Di Fatta, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
Improved SOM Learning Using Simulated Annealing. ICANN (1) (2007)
Giuseppe Di Fatta, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso, Michael R. Berthold, Salvatore Gaglio
Context-Aware Visual Exploration of Molecular Datab. ICDM Workshops (2006)