Alba C. M. A. Melo

Publication Activity (10 Years)

Years Active: 2002-2024
Publications (10 Years): 29

Top Topics

Parameter Tuning

Sensitivity Analysis

Top Venues

Concurr. Comput. Pract. Exp.

Future Gener. Comput. Syst.

J. Parallel Distributed Comput.

Publications

Aldo H. D. Mendes, Michel J. F. Rosa, Marcelo Antonio Marotta, Aletéia P. F. Araújo, Alba C. M. A. Melo, Célia Ghedini Ralha
MAS-Cloud+: A novel multi-agent architecture with reasoning models for resource management in multiple providers. Future Gener. Comput. Syst. 154 (2024)
Emerson de Araujo Macedo, Alba C. M. A. Melo
Adaptive patch grid strategy for parallel protein folding using atomic burials with NAMD. J. Parallel Distributed Comput. 189 (2024)
Alan L. Nunes, Alba C. M. A. Melo, Claude Tadonki, Cristina Boeres, Daniel de Oliveira, Lúcia Maria de Assumpção Drummond
Optimizing computational costs of Spark for SARS-CoV-2 sequences comparisons on a commercial cloud. Concurr. Comput. Pract. Exp. 35 (18) (2023)
Gustavo Portella, Eduardo Y. Nakano, Genaína Nunes Rodrigues, Azzedine Boukerche, Alba C. M. A. Melo
A Novel Statistical and Neural Network Combined Approach for the Cloud Spot Market. IEEE Trans. Cloud Comput. 11 (1) (2023)
Willian Barreiros Jr., Alba C. M. A. Melo, Jun Kong, Renato Ferreira, Tahsin M. Kurç, Joel H. Saltz, George Teodoro
Efficient microscopy image analysis on CPU-GPU systems with cost-aware irregular data partitioning. J. Parallel Distributed Comput. 164 (2022)
Jeremias M. Gomes, Jun Kong, Tahsin M. Kurç, Alba C. M. A. Melo, Renato Ferreira, Joel H. Saltz, George Teodoro
Building robust pathology image analyses with uncertainty quantification. Comput. Methods Programs Biomed. 208 (2021)
Carlos Antônio Campos Jorge, Alexandre Solon Nery, Alba C. M. A. Melo, Alfredo Goldman
A CPU-FPGA heterogeneous approach for biological sequence comparison using high-level synthesis. Concurr. Comput. Pract. Exp. 33 (4) (2021)
Vanessa S. Silva, Maiana O. C. Costa, Maria Clicia Stelling de Castro, Helena S. Silva, Maria Emília M. T. Walter, Alba C. M. A. Melo, Kary A. C. Ocaña, Marcelo T. dos Santos, Marisa F. Nicolas, Anna Cristina C. Carvalho, Andrea Henriques-Pons, Fabrício Alves Barbosa da Silva
CellHeap: A Workflow for Optimizing COVID-19 Single-Cell RNA-Seq Data Processing in the Santos Dumont Supercomputer. BSB (2021)
Marco Antonio C. de Figueiredo, João Paulo Navarro, Edans Flavius de Oliveira Sandes, George Teodoro, Alba C. M. A. Melo
Parallel Fine-Grained Comparison of Long DNA Sequences in Homogeneous and Heterogeneous GPU Platforms With Pruning. IEEE Trans. Parallel Distributed Syst. 32 (12) (2021)
Rafaela C. Brum, Walisson P. Sousa, Alba C. M. A. Melo, Cristiana Bentes, Maria Clicia Stelling de Castro, Lúcia Maria de A. Drummond
A Fault Tolerant and Deadline Constrained Sequence Alignment Application on Cloud-Based Spot GPU Instances. Euro-Par (2021)
Luan Teylo, Alan L. Nunes, Alba C. M. A. Melo, Cristina Boeres, Lúcia Maria de A. Drummond, Natalia F. Martins
Comparing SARS-CoV-2 Sequences using a Commercial Cloud with a Spot Instance Based Dynamic Scheduler. CCGRID (2021)
Rafael A. Lopes, Samuel Thibault, Alba C. M. A. Melo
MASA-StarPU: Parallel Sequence Comparison with Multiple Scheduling Policies and Pruning. SBAC-PAD (2020)
Edans F. de O. Sandes, George Luiz Medeiros Teodoro, Alba C. M. A. Melo
Bitmap filter: Speeding up exact set similarity joins with bitwise operations. Inf. Syst. 88 (2020)
Willian Barreiros Jr., Jeremias Moreira, Tahsin M. Kurç, Jun Kong, Alba C. M. A. Melo, Joel H. Saltz, George Teodoro
Optimizing parameter sensitivity analysis of large-scale microscopy image analysis workflows with multilevel computation reuse. Concurr. Comput. Pract. Exp. 32 (2) (2020)
Marco Antonio C. de Figueiredo, Edans Flavius de Oliveira Sandes, George Teodoro, Alba C. M. A. Melo
Parallel Comparison of Huge DNA Sequences in Multiple GPUs with Block Pruning. PDP (2020)
Daniel Sundfeld, George Teodoro, Jakob Hull Havgaard, Jan Gorodkin, Alba C. M. A. Melo
Using GPU to accelerate the pairwise structural RNA alignment with base pair probabilities. Concurr. Comput. Pract. Exp. 32 (10) (2020)
Célia Ghedini Ralha, Aldo H. D. Mendes, Luiz A. Laranjeira, Aletéia P. F. Araújo, Alba C. M. A. Melo
Multiagent system for dynamic resource provisioning in cloud computing platforms. Future Gener. Comput. Syst. 94 (2019)
Gabriel H. G. Silva, Edans F. de O. Sandes, George Teodoro, Alba C. M. A. Melo
Using Multiple Fickett Bands to Accelerate Biological Sequence Comparisons. J. Comput. Biol. 26 (9) (2019)
Gustavo Portella, Genaína Nunes Rodrigues, Eduardo Y. Nakano, Alba C. M. A. Melo
Statistical analysis of Amazon EC2 cloud pricing models. Concurr. Comput. Pract. Exp. 31 (18) (2019)
Gustavo Portella, Eduardo Y. Nakano, Genaína Nunes Rodrigues, Alba C. M. A. Melo
Utility-Based Strategy for Balanced Cost and Availability at the Cloud Spot Market. CLOUD (2019)
Jeremias M. Gomes, Willian Barreiros Jr., Tahsin M. Kurç, Alba C. M. A. Melo, Jun Kong, Joel H. Saltz, George Teodoro
Sensitivity analysis in digital pathology: Handling large number of parameters with compute expensive workflows. Comput. Biol. Medicine 108 (2019)
Luis F. R. Taveira, Tahsin M. Kurç, Alba C. M. A. Melo, Jun Kong, Erich Bremer, Joel H. Saltz, George Teodoro
Multi-objective Parameter Auto-tuning for Tissue Image Segmentation Workflows. J. Digit. Imaging 32 (3) (2019)
Eduardo Scartezini, Willian Barreiros Jr., Tahsin M. Kurç, Jun Kong, Alba C. M. A. Melo, Joel H. Saltz, George Teodoro
Run-time Parameter Sensitivity Analysis Optimizations. CoRR (2019)
Luis F. R. Taveira, Tahsin M. Kurç, Alba C. M. A. Melo, Jun Kong, Erich Bremer, Joel H. Saltz, George Teodoro
Tuning for Tissue Image Segmentation Workflows for Accuracy and Performance. CoRR (2018)
Willian Barreiros, George Teodoro, Tahsin M. Kurç, Jun Kong, Alba C. M. A. Melo, Joel H. Saltz
Parallel and Efficient Sensitivity Analysis of Microscopy Image Segmentation Workflows in Hybrid Systems. CLUSTER (2017)
George Teodoro, Tahsin M. Kurç, Luis F. R. Taveira, Alba C. M. A. Melo, Yi Gao
Algorithm sensitivity analysis and parameter tuning for tissue image segmentation pipelines. Bioinform. 33 (7) (2017)
Gabriel H. G. Silva, Edans F. de O. Sandes, George Teodoro, Alba C. M. A. Melo
Parallel Biological Sequence Comparison in Linear Space with Multiple Adjustable Bands. AlCoB (2017)
Edans F. de O. Sandes, George Teodoro, Alba C. M. A. Melo
Bitmap Filter: Speeding up Exact Set Similarity Joins with Bitwise Operations. CoRR (2017)
George Teodoro, Tahsin M. Kurç, Luis F. R. Taveira, Alba C. M. A. Melo, Jun Kong, Joel H. Saltz
Efficient Methods and Parallel Execution for Algorithm Sensitivity Analysis with Parameter Tuning on Microscopy Imaging Datasets. CoRR (2016)
Weigang Li, Marcos Vinícius Pinheiro Dib, Wesley Martins Teles, Vlaudemir Morais de Andrade, Alba C. M. A. Melo, Judas T. Cariolano
Using ant-behavior-based simulation model AntWeb to improve website organization. Data Mining and Knowledge Discovery: Theory, Tools, and Technology (2002)