Parallel Fine-Grained Comparison of Long DNA Sequences in Homogeneous and Heterogeneous GPU Platforms With Pruning.
Marco Antonio C. de FigueiredoJoão Paulo NavarroEdans Flavius de Oliveira SandesGeorge TeodoroAlba C. M. A. MeloPublished in: IEEE Trans. Parallel Distributed Syst. (2021)
Keyphrases
- fine grained
- dna sequences
- coarse grained
- massively parallel
- parallel implementation
- parallel processing
- access control
- parallel computing
- tandem repeats
- human genome
- dna sequencing
- dna computing
- sequence patterns
- graphics processing units
- tightly coupled
- motif discovery
- machine learning
- gene structure prediction
- shared memory
- binding sites
- coding regions
- problems in computational biology
- biological sequences
- rna sequences
- general purpose
- high level
- metadata