Daniel Sundfeld

Publication Activity (10 Years)

Years Active: 2013-2020
Publications (10 Years): 4

Top Topics

General Purpose Computing

Phylogenetic Trees

Sequence Alignment

Top Venues

Concurr. Comput. Pract. Exp.

J. Parallel Distributed Comput.

Publications

Daniel Sundfeld, George Teodoro, Jakob Hull Havgaard, Jan Gorodkin, Alba C. M. A. Melo
Using GPU to accelerate the pairwise structural RNA alignment with base pair probabilities. Concurr. Comput. Pract. Exp. 32 (10) (2020)
Daniel Sundfeld, Caina Razzolini, George Teodoro, Azzedine Boukerche, Alba Cristina Magalhaes Alves de Melo
PA-Star: A disk-assisted parallel A-Star strategy with locality-sensitive hash for multiple sequence alignment. J. Parallel Distributed Comput. 112 (2018)
Daniel Sundfeld, Jakob Hull Havgaard, Jan Gorodkin, Alba Cristina Magalhaes Alves de Melo
CUDA-Sankoff: Using GPU to Accelerate the Pairwise Structural RNA Alignment. PDP (2017)
Daniel Sundfeld, Jakob Hull Havgaard, Alba Cristina Magalhaes Alves de Melo, Jan Gorodkin
Foldalign 2.5: multithreaded implementation for pairwise structural RNA alignment. Bioinform. 32 (8) (2016)
Daniel Sundfeld, George Teodoro, Alba Cristina Magalhaes Alves de Melo
Parallel A-Star Multiple Sequence Alignment with Locality-Sensitive Hash Functions. CISIS (2015)
Daniel Sundfeld, Alba Cristina Magalhaes Alves de Melo
MSA-GPU: Exact Multiple Sequence Alignment Using GPU. BSB (2013)