Parallel A-Star Multiple Sequence Alignment with Locality-Sensitive Hash Functions.
Daniel SundfeldGeorge TeodoroAlba Cristina Magalhaes Alves de MeloPublished in: CISIS (2015)
Keyphrases
- locality sensitive
- hash functions
- multiple sequence alignment
- locality sensitive hashing
- similarity search
- hyperplane
- protein sequences
- memory efficient
- high dimensional
- computational biology
- biological sequences
- secondary structure
- genetic algorithm
- data distribution
- hamming distance
- sequence alignment
- nearest neighbor search
- phylogenetic trees
- hash table
- data sets
- high dimensional spaces
- nearest neighbor
- data model
- pairwise
- databases