Vivarium: an interface and engine for integrative multiscale modeling in computational biology.
Eran AgmonRyan K. SpanglerChristopher J. SkalnikWilliam PooleShayn M. PeirceJerry H. MorrisonMarkus W. CovertPublished in: Bioinform. (2022)
Keyphrases
- computational biology
- multiscale
- protein sequences
- molecular biology
- machine learning
- sequence analysis
- natural language processing
- image processing
- wavelet transform
- user interface
- biological sequences
- protein structure prediction
- multi class
- scale space
- multiple sequence alignment
- biological processes
- string kernels
- protein classification
- air fuel ratio
- gene expression profiling
- systems biology
- support vector machine
- knowledge representation
- multiresolution
- computer vision