Yu-Dong Cai

Publication Activity (10 Years)

Years Active: 2001-2024
Publications (10 Years): 12

Top Topics

Protein Interaction

Candidate Genes

Cancer Diagnosis

Microarray Data

Top Venues

Comput. Biol. Medicine

Comput. Math. Methods Medicine

Artif. Intell. Medicine

Publications

Jingxin Ren, Qian Gao, Xianchao Zhou, Lei Chen, Wei Guo, Kaiyan Feng, Tao Huang, Yu-Dong Cai
Identification of key gene expression associated with quality of life after recovery from COVID-19. Medical Biol. Eng. Comput. 62 (4) (2024)
Jingxin Ren, Xianchao Zhou, Ke Huang, Lei Chen, Wei Guo, Kaiyan Feng, Tao Huang, Yu-Dong Cai
Identification of key genes associated with persistent immune changes and secondary immune activation responses induced by influenza vaccination after COVID-19 recovery by machine learning methods. Comput. Biol. Medicine 169 (2024)
Lin Li, Feiming Huang, Yu-Hang Zhang, Yu-Dong Cai
Identifying allergic-rhinitis-associated genes with random-walk-based method in PPI network. Comput. Biol. Medicine 175 (2024)
Xiaoyong Pan, Lei Chen, Min Liu, Zhibin Niu, Tao Huang, Yu-Dong Cai
Identifying Protein Subcellular Locations With Embeddings-Based node2loc. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (2) (2022)
Yu-Hang Zhang, Tao Zeng, Xiaoyong Pan, Wei Guo, Zijun Gan, Yunhua Zhang, Tao Huang, Yu-Dong Cai
Screening Dys-Methylation Genes and Rules for Cancer Diagnosis by Using the Pan-Cancer Study. IEEE Access 8 (2020)
Wei Guo, Tao Zeng, Tao Huang, Yu-Dong Cai
Disease Cluster Detection and Functional Characterization. IEEE Access 8 (2020)
Lei Chen, Xiaoyong Pan, Tao Zeng, Yu-Hang Zhang, Tao Huang, Yu-Dong Cai
Identifying Essential Signature Genes and Expression Rules Associated With Distinctive Development Stages of Early Embryonic Cells. IEEE Access 7 (2019)
Lei Chen, Yu-Hang Zhang, Guohui Lu, Tao Huang, Yu-Dong Cai
Analysis of cancer-related lncRNAs using gene ontology and KEGG pathways. Artif. Intell. Medicine 76 (2017)
Lei Chen, Shaopeng Wang, Yu-Hang Zhang, Jiarui Li, Zhi-Hao Xing, Jialiang Yang, Tao Huang, Yu-Dong Cai
Identify Key Sequence Features to Improve CRISPR sgRNA Efficacy. IEEE Access 5 (2017)
You Zhou, Tao Huang, Guohua Huang, Ning Zhang, Xiangyin Kong, Yu-Dong Cai
Prediction of protein N-formylation and comparison with N-acetylation based on a feature selection method. Neurocomputing 217 (2016)
Fei Yuan, You Zhou, Meng Wang, Jing Yang, Kai Wu, Changhong Lu, Xiangyin Kong, Yu-Dong Cai
Identifying New Candidate Genes and Chemicals Related to Prostate Cancer Using a Hybrid Network and Shortest Path Approach. Comput. Math. Methods Medicine 2015 (2015)
Baoman Wang, Fei Yuan, Xiangyin Kong, Lan-Dian Hu, Yu-Dong Cai
Identifying Novel Candidate Genes Related to Apoptosis from a Protein-Protein Interaction Network. Comput. Math. Methods Medicine 2015 (2015)
Tao Huang, Lei Chen, Xiao-Jun Liu, Yu-Dong Cai
Predicting triplet of transcription factor - mediating enzyme - target gene by functional profiles. Neurocomputing 74 (17) (2011)
Lei Chen, Kai-Yan Feng, Yu-Dong Cai, Kuo-Chen Chou, Hai-Peng Li
Predicting the network of substrate-enzyme-product triads by combining compound similarity and functional domain composition. BMC Bioinform. 11 (2010)
Bing Niu, Lin Lu, Liang Liu, Tian Hong Gu, Kai-Yan Feng, Wen-Cong Lu, Yu-Dong Cai
HIV-1 protease cleavage site prediction based on amino acid property. J. Comput. Chem. 30 (1) (2009)
Yu-Dong Cai, Guo-Ping Zhou
Predicting Protein-Protein Interactions with Pseudo Amino Acid Composition. BMEI (1) (2008)
Ziliang Qian, Lingyi Lu, Xiao-Jun Liu, Yu-Dong Cai, Yixue Li
An approach to predict transcription factor DNA binding site specificity based upon gene and transcription factor functional categorization. Bioinform. 23 (18) (2007)
Lingyi Lu, Ziliang Qian, Yu-Dong Cai, Yixue Li
ECS: An automatic enzyme classifier based on functional domain composition. Comput. Biol. Chem. 31 (3) (2007)
Guoqing Zhang, Zhi-Wei Cao, Qing-ming Luo, Yu-Dong Cai, Yixue Li
Operon prediction based on SVM. Comput. Biol. Chem. 30 (3) (2006)
Kuo-Chen Chou, Yu-Dong Cai
Prediction of Membrane Protein Types by Incorporating Amphipathic Effects. J. Chem. Inf. Model. 45 (2) (2005)
Kuo-Chen Chou, Yu-Dong Cai
Predicting protein localization in budding Yeast. Bioinform. 21 (7) (2005)
Yu-Dong Cai, Andrew J. Doig
Prediction of Saccharomyces cerevisiae protein functional class from functional domain composition. Bioinform. 20 (8) (2004)
Yu-Dong Cai, Kuo-Chen Chou
Predicting subcellular localization of proteins in a hybridization space. Bioinform. 20 (7) (2004)
Yu-Dong Cai, Xiao-Jun Liu, Kuo-Chen Chou
Prediction of protein secondary structure content by artificial neural network. J. Comput. Chem. 24 (6) (2003)
Yu-Dong Cai, Xiao-Jun Liu, Xue-biao Xu, Kuo-Chen Chou
Artificial Neural Network Method for Predicting Protein Secondary Structure Content. Comput. Chem. 26 (4) (2002)
Yu-Dong Cai, Xiao-Jun Liu, Xue-biao Xu, Kuo-Chen Chou
Prediction of Protein Structural Classes by Support Vector Machines. Comput. Chem. 26 (3) (2002)
Yu-Dong Cai, Xiao-Jun Liu, Kuo-Chen Chou
Artificial Neural Network Model for Predicting Protein Subcellular Location. Comput. Chem. 26 (2) (2002)
Yu-Dong Cai, Xiao-Jun Liu, Xue-biao Xu, Kuo-Chen Chou
Support vector machines for predicting HIV protease cleavage sites in protein. J. Comput. Chem. 23 (2) (2002)
Yu-Dong Cai, Xiao-Jun Liu, Xue-biao Xu, Guo-Ping Zhou
Support Vector Machines for predicting protein structural class. BMC Bioinform. 2 (2001)