An approach to predict transcription factor DNA binding site specificity based upon gene and transcription factor functional categorization.
Ziliang QianLingyi LuXiao-Jun LiuYu-Dong CaiYixue LiPublished in: Bioinform. (2007)
Keyphrases
- binding sites
- transcription factors
- gene expression
- dna binding
- gene regulation
- cis regulatory
- regulatory networks
- transcriptional regulation
- microarray
- dna sequences
- biological processes
- saccharomyces cerevisiae
- transcription factor binding sites
- cell cycle
- sequence data
- motif discovery
- protein families
- gene expression data
- genome sequences
- gene sets
- biological sequences
- statistical significance
- gene expression levels
- gene expression patterns
- microarray data
- component analysis
- protein interaction
- regulatory elements
- genome wide
- experimental conditions
- biomedical literature
- gene expression profiles
- microarray datasets
- high throughput
- gene selection
- feature selection