Yu-Chiao Chiu

Publication Activity (10 Years)

Years Active: 2013-2024
Publications (10 Years): 12

Top Topics

Top Venues

Briefings Bioinform.

Publications

Li-Ju Wang, Michael Ning, Tapsya Nayak, Michael J. Kasper, Satdarshan P. Monga, Yufei Huang, Yidong Chen, Yu-Chiao Chiu
shinyDeepDR: A user-friendly R Shiny app for predicting anti-cancer drug response using deep learning. Patterns 5 (2) (2024)
Mario Flores, Zhentao Liu, Tinghe Zhang, Md Musaddaqui Hasib, Yu-Chiao Chiu, Zhenqing Ye, Karla Paniagua, Sumin Jo, Jianqiu Zhang, Shou-Jiang Gao, Yu-Fang Jin, Yidong Chen, Yufei Huang
Deep learning tackles single-cell analysis - a survey of deep learning for scRNA-seq analysis. Briefings Bioinform. 23 (1) (2022)
Milad Mostavi, Yu-Chiao Chiu, Yidong Chen, Yufei Huang
CancerSiamese: one-shot learning for predicting primary and metastatic tumor types unseen during model training. BMC Bioinform. 22 (1) (2021)
Yu-Chiao Chiu, Hung-I Harry Chen, Aparna Gorthi, Milad Mostavi, Siyuan Zheng, Yufei Huang, Yidong Chen
Deep learning of pharmacogenomics resources: moving towards precision oncology. Briefings Bioinform. 21 (6) (2020)
Milad Mostavi, Yu-Chiao Chiu, Yufei Huang, Yidong Chen
Convolutional neural network models for cancer type prediction based on gene expression. CoRR (2019)
Yu-Chiao Chiu, Tzu-Hung Hsiao, Li-Ju Wang, Yidong Chen, Eric Y. Chuang
Analyzing Differential Regulatory Networks Modulated by Continuous-State Genomic Features in Glioblastoma Multiforme. IEEE ACM Trans. Comput. Biol. Bioinform. 15 (6) (2018)
Yu-Chiao Chiu, Hung-I Harry Chen, Tinghe Zhang, Songyao Zhang, Aparna Gorthi, Li-Ju Wang, Yufei Huang, Yidong Chen
Predicting drug response of tumors from integrated genomic profiles by deep neural networks. CoRR (2018)
Hung-I Harry Chen, Yu-Chiao Chiu, Tinghe Zhang, Songyao Zhang, Yufei Huang, Yidong Chen
GSAE: an autoencoder with embedded gene-set nodes for genomics functional characterization. CoRR (2018)
Yu-Chiao Chiu, Li-Ju Wang, Tzu-Pin Lu, Tzu-Hung Hsiao, Eric Y. Chuang, Yidong Chen
Differential correlation analysis of glioblastoma reveals immune ceRNA interactions predictive of patient survival. BMC Bioinform. 18 (1) (2017)
Yu-Ching Hsu, Yu-Chiao Chiu, Yidong Chen, Tzu-Hung Hsiao, Eric Y. Chuang
A simple gene set-based method accurately predicts the synergy of drug pairs. BMC Syst. Biol. 10 (S-3) (2016)
Chin-Ting Wu, Tzu-Hung Hsiao, Yu-Chiao Chiu, Yu-Ching Hsu, Eric Y. Chuang, Yidong Chen
Patho-finder - A fast and accurate program for pathogen identification through RNA-seq. BIBM (2015)
Yu-Chiao Chiu, Kai-Wen Liang, Tzu-Hung Hsiao, Yidong Chen, Eric Y. Chuang
Analyzing differential regulatory networks modulated by continuous-state genomic features in glioblastoma multiforme. BIBM (2015)
Mau-Tsuen Yang, Yu-Chiao Chiu
Note-Taking for 3D Curricular Contents using Markerless Augmented Reality. Interact. Comput. 26 (4) (2014)
Yu-Chiao Chiu, Eric Y. Chuang, Tzu-Hung Hsiao, Yidong Chen
Characterization of conditions for competing endogenous RNA regulation in GBM. GENSiPS (2013)
Mario Flores, Tzu-Hung Hsiao, Yu-Chiao Chiu, Eric Y. Chuang, Yufei Huang, Yidong Chen
Gene Regulation, Modulation, and Their Applications in Gene Expression Data Analysis. Adv. Bioinformatics 2013 (2013)
Yu-Chiao Chiu, Eric Y. Chuang, Tzu-Hung Hsiao, Yidong Chen
Modeling competing endogenous RNA regulatory networks in glioblastoma multiforme. BIBM (2013)