Yifei Qi

Publication Activity (10 Years)

Years Active: 2012-2024
Publications (10 Years): 29

Top Topics

Dictionary Learning

Molecular Dynamics Simulations

State Estimation

Top Venues

J. Comput. Chem.

J. Chem. Inf. Model.

IEEE Trans. Autom. Control.

Publications

Xiangying Zhang, Haotian Gao, Haojie Wang, Zhihang Chen, Zhe Zhang, Xinchong Chen, Yan Li, Yifei Qi, Renxiao Wang
PLANET: A Multi-objective Graph Neural Network Model for Protein-Ligand Binding Affinity Prediction. J. Chem. Inf. Model. 64 (7) (2024)
Hua Deng, Kang Xu, Rongsheng Li, Yifei Qi
Chinese Text Error Correction Based on PE-T5 Model. CNIOT (2024)
Shengtao Lin, Zinan Wang, Jiaojiao Zhang, Pan Wang, Han Wu, Yifei Qi
Radiation build-up and dissipation in Raman random fiber laser. Sci. China Inf. Sci. 67 (1) (2024)
Yihao Ai, Yifei Qi, Bo Wang, Yu Cheng, Xinchao Wang, Robby T. Tan
Domain-Adaptive 2D Human Pose Estimation via Dual Teachers in Extremely Low-Light Conditions. CoRR (2024)
Shaofeng Liao, Yujun Zhang, Yifei Qi, Zhuqing Zhang
Evaluation of sequence-based predictors for phase-separating protein. Briefings Bioinform. 24 (4) (2023)
Xudong Zhang, Jun Mao, Min Wei, Yifei Qi, John Z. H. Zhang
HergSPred: Accurate Classification of hERG Blockers/Nonblockers with Machine-Learning Models. J. Chem. Inf. Model. 62 (8) (2022)
Shengtao Lin, Zinan Wang, Yifei Qi, Yunjiang Rao
Long-distance random fiber laser sensing system with ultra-fast signal demodulation. OFC (2022)
Min Wei, Xudong Zhang, Xiaolin Pan, Bo Wang, Changge Ji, Yifei Qi, John Z. H. Zhang
HobPre: accurate prediction of human oral bioavailability for small molecules. J. Cheminformatics 14 (1) (2022)
Ya Gao, Jumin Lee, Iain Peter Shand Smith, Hwayoung Lee, Seonghoon Kim, Yifei Qi, Jeffery B. Klauda, Göran Widmalm, Syma Khalid, Wonpil Im
CHARMM-GUI Supports Hydrogen Mass Repartitioning and Different Protonation States of Phosphates in Lipopolysaccharides. J. Chem. Inf. Model. 61 (2) (2021)
Chongrong Fang, Yifei Qi, Jiming Chen, Rui Tan, Wei Xing Zheng
Stealthy Actuator Signal Attacks in Stochastic Control Systems: Performance and Limitations. IEEE Trans. Autom. Control. 65 (9) (2020)
Qian Li, Xiaojun Peng, Yuanqing Li, Wenqin Tang, Jia'an Zhu, Jing Huang, Yifei Qi, Zhuqing Zhang
LLPSDB: a database of proteins undergoing liquid-liquid phase separation in vitro. Nucleic Acids Res. 48 (Database-Issue) (2020)
Chongrong Fang, Yifei Qi, Peng Cheng, Wei Xing Zheng
Optimal periodic watermarking schedule for replay attack detection in cyber-physical systems. Autom. 112 (2020)
Yifei Qi, John Z. H. Zhang
DenseCPD: Improving the Accuracy of Neural-Network-Based Computational Protein Sequence Design with DenseNet. J. Chem. Inf. Model. 60 (3) (2020)
Peng Cheng, Zeyu Yang, Jiming Chen, Yifei Qi, Ling Shi
An Event-Based Stealthy Attack on Remote State Estimation. IEEE Trans. Autom. Control. 65 (10) (2020)
Yifei Qi, Jumin Lee, Xi Cheng, Rong Shen, Shahidul M. Islam, Benoît Roux, Wonpil Im
CHARMM-GUI DEER facilitator for spin-pair distance distribution calculations and preparation of restrained-ensemble molecular dynamics simulations. J. Comput. Chem. 41 (5) (2020)
Lidong He, Jiming Chen, Yifei Qi
Event-Based State Estimation: Optimal Algorithm With Generalized Closed Skew Normal Distribution. IEEE Trans. Autom. Control. 64 (1) (2019)
Yifei Qi, Jumin Lee, Jeffery B. Klauda, Wonpil Im
CHARMM-GUI Nanodisc Builder for modeling and simulation of various nanodisc systems. J. Comput. Chem. 40 (7) (2019)
Liping He, Jingxiao Bao, Yunpeng Yang, Suzhen Dong, Lujia Zhang, Yifei Qi, John Z. H. Zhang
Study of SHMT2 Inhibitors and Their Binding Mechanism by Computational Alanine Scanning. J. Chem. Inf. Model. 59 (9) (2019)
Dading Huang, Yifei Qi, Jianing Song, John Z. H. Zhang
Calculation of hot spots for protein-protein interaction in p53/PMI-MDM2/MDMX complexes. J. Comput. Chem. 40 (9) (2019)
Huali Cao, Jingxue Wang, Liping He, Yifei Qi, John Z. H. Zhang
DeepDDG: Predicting the Stability Change of Protein Point Mutations Using Neural Networks. J. Chem. Inf. Model. 59 (4) (2019)
Heng Zhang, Yifei Qi, Junfeng Wu, Lingkun Fu, Lidong He
DoS Attack Energy Management Against Remote State Estimation. IEEE Trans. Control. Netw. Syst. 5 (1) (2018)
Sunhwan Jo, Xi Cheng, Jumin Lee, Seonghoon Kim, Sang-Jun Park, Dhilon S. Patel, Andrew H. Beaven, Kyu Il Lee, Huan Rui, Soohyung Park, Hui Sun Lee, Benoît Roux, Alexander D. MacKerell Jr., Jeffrey B. Klauda, Yifei Qi, Wonpil Im
CHARMM-GUI 10 years for biomolecular modeling and simulation. J. Comput. Chem. 38 (15) (2017)
Wei Xu, Jin Wang, Qing Zhu, Xi Wu, Yifei Qi
Depth map super-resolution via multiclass dictionary learning with geometrical directions. VCIP (2017)
Pin-Chia Hsu, Bart M. H. Bruininks, Damien Jefferies, Paulo Cesar Telles de Souza, Jumin Lee, Dhilon S. Patel, Siewert J. Marrink, Yifei Qi, Syma Khalid, Wonpil Im
CHARMM-GUI Martini Maker for modeling and simulation of complex bacterial membranes with lipopolysaccharides. J. Comput. Chem. 38 (27) (2017)
Chongrong Fang, Yifei Qi, Peng Cheng, Wei Xing Zheng
Cost-effective watermark based detector for replay attacks on cyber-physical systems. ASCC (2017)
Yifei Qi, Peng Cheng, Jiming Chen
Optimal Sensor Data Scheduling for Remote Estimation Over a Time-Varying Channel. IEEE Trans. Autom. Control. 62 (9) (2017)
Heng Zhang, Yifei Qi, Junfeng Wu
Optimal jamming power allocation against remote state estimation. ACC (2017)
Yifei Qi, Peng Cheng, Jing Bai, Jiming Chen, Adrien Guenard, Ye-Qiong Song, Zhiguo Shi
Energy-Efficient Target Tracking by Mobile Sensors With Limited Sensing Range. IEEE Trans. Ind. Electron. 63 (11) (2016)
Peng Cheng, Yifei Qi, Kefei Xin, Jiming Chen, Lihua Xie
Energy-Efficient Data Forwarding for State Estimation in Multi-Hop Wireless Sensor Networks. IEEE Trans. Autom. Control. 61 (5) (2016)
Yifei Qi, Peng Cheng, Ling Shi, Jiming Chen
Event-based attack against remote state estimation. CDC (2015)
Yifei Qi, Xi Cheng, Wei Han, Sunhwan Jo, Klaus Schulten, Wonpil Im
CHARMM-GUI PACE CG Builder for Solution, Micelle, and Bilayer Coarse-Grained Simulations. J. Chem. Inf. Model. 54 (3) (2014)
Yifei Qi, Peng Cheng, Jiming Chen
Dynamic sensor data scheduling for remote estimation over Gilbert-Elliot channel. ICCC (2014)
Emilia L. Wu, Xi Cheng, Sunhwan Jo, Huan Rui, Kevin C. Song, Eder M. Dávila-Contreras, Yifei Qi, Jumin Lee, Viviana Monje-Galvan, Richard M. Venable, Jeffery B. Klauda, Wonpil Im
toward realistic biological membrane simulations. J. Comput. Chem. 35 (27) (2014)
Jong Cheol Jeong, Sunhwan Jo, Emilia L. Wu, Yifei Qi, Viviana Monje-Galvan, Min Sun Yeom, Lev Gorenstein, Feng Chen, Jeffery B. Klauda, Wonpil Im
ST-analyzer: A web-based user interface for simulation trajectory analysis. J. Comput. Chem. 35 (12) (2014)
Bingjun Han, Xin Zhang, Yifei Qi, Yuehong Gao, Dacheng Yang
QoE Model Based Optimization for Streaming Media Service Considering Equipment and Environment Factors. Wirel. Pers. Commun. 66 (3) (2012)
Bingjun Han, Xin Zhang, Yifei Qi, Yuehong Gao, Yitong Liu, Dacheng Yang
A surrounding-adaptive QoE adjustment approach for optimization of capacity and quality of air interface. ICT (2012)