Login / Signup
Yi Guo
ORCID
Publication Activity (10 Years)
Years Active: 2016-2024
Publications (10 Years): 61
Top Topics
Cancer Patients
Electronic Health Records
Clinical Trials
Natural Language Processing
Top Venues
AMIA
CoRR
J. Am. Medical Informatics Assoc.
J. Biomed. Informatics
</>
Publications
</>
Aokun Chen
,
Yunpeng Zhao
,
Yi Zheng
,
Hui Hu
,
Xia Hu
,
Jennifer N. Fishe
,
William R. Hogan
,
Elizabeth A. Shenkman
,
Yi Guo
,
Jiang Bian
Exploring the Relation between Contextual Social Determinants of Health and COVID-19 Occurrence and Hospitalization.
Informatics
11 (2024)
Zehao Yu
,
Cheng Peng
,
Xi Yang
,
Chong Dang
,
Prakash Adekkanattu
,
Braja Gopal Patra
,
Yifan Peng
,
Jyotishman Pathak
,
Debbie L. Wilson
,
Ching-Yuan Chang
,
Wei-Hsuan Lo-Ciganic
,
Thomas J. George
,
William R. Hogan
,
Yi Guo
,
Jiang Bian
,
Yonghui Wu
Identifying social determinants of health from clinical narratives: A study of performance, documentation ratio, and potential bias.
J. Biomed. Informatics
153 (2024)
Aokun Chen
,
Qian Li
,
Yu Huang
,
Yongqiu Li
,
Yu-Neng Chuang
,
Xia Hu
,
Serena Guo
,
Yonghui Wu
,
Yi Guo
,
Jiang Bian
Feasibility of Identifying Factors Related to Alzheimer's Disease and Related Dementia in Real-World Data.
CoRR
(2024)
Ziyi Chen
,
Mengyuan Zhang
,
Mustafa Mohammed Ahmed
,
Yi Guo
,
Thomas J. George
,
Jiang Bian
,
Yonghui Wu
Narrative Feature or Structured Feature? A Study of Large Language Models to Identify Cancer Patients at Risk of Heart Failure.
CoRR
(2024)
Shuang Yang
,
Xi Yang
,
Tianchen Lyu
,
James L. Huang
,
Aokun Chen
,
Xing He
,
Dejana Braithwaite
,
Hiren J. Mehta
,
Yonghui Wu
,
Yi Guo
,
Jiang Bian
Extracting Pulmonary Nodules and Nodule Characteristics from Radiology Reports of Lung Cancer Screening Patients Using Transformer Models.
J. Heal. Informatics Res.
8 (3) (2024)
Zhaoyi Chen
,
Hansi Zhang
,
Xi Yang
,
Songzi Wu
,
Xing He
,
Jie Xu
,
Jingchuan Guo
,
Mattia C. F. Prosperi
,
Fei Wang
,
Hua Xu
,
Yong Chen
,
Hui Hu
,
Steven DeKosky
,
Matthew Farrer
,
Yi Guo
,
Yonghui Wu
,
Jiang Bian
Assess the documentation of cognitive tests and biomarkers in electronic health records via natural language processing for Alzheimer's disease and related dementias.
Int. J. Medical Informatics
170 (2023)
Aokun Chen
,
Qian Li
,
Elizabeth Shenkman
,
Yonghui Wu
,
Yi Guo
,
Jiang Bian
Exploring the Effect of Eligibility Criteria on AD Severity and Severe Adverse Event in Eligible Patients.
ICHI
(2023)
Cheng Peng
,
Xi Yang
,
Aokun Chen
,
Kaleb E. Smith
,
Nima Pournejatian
,
Anthony B. Costa
,
Cheryl Martin
,
Mona G. Flores
,
Ying Zhang
,
Tanja Magoc
,
Gloria P. Lipori
,
Duane A. Mitchell
,
Naykky Singh Ospina
,
Mustafa M. Ahmed
,
William R. Hogan
,
Elizabeth Shenkman
,
Yi Guo
,
Jiang Bian
,
Yonghui Wu
A Study of Generative Large Language Model for Medical Research and Healthcare.
CoRR
(2023)
Piaopiao Li
,
Tianchen Lyu
,
Khalid Alkhuzam
,
Eliot Spector
,
William T. Donahoo
,
Sarah Bost
,
Yonghui Wu
,
William R. Hogan
,
Mattia Prosperi
,
Desmond A. Schatz
,
Mark A Atkinson
,
Michael J. Haller
,
Elizabeth A. Shenkman
,
Yi Guo
,
Jiang Bian
,
Hui Shao
The role of health system penetration rate in estimating the prevalence of type 1 diabetes in children and adolescents using electronic health records.
J. Am. Medical Informatics Assoc.
31 (1) (2023)
Aokun Chen
,
Zehao Yu
,
Xi Yang
,
Yi Guo
,
Jiang Bian
,
Yonghui Wu
Contextualized medication information extraction using Transformer-based deep learning architectures.
J. Biomed. Informatics
142 (2023)
Aokun Chen
,
Zehao Yu
,
Xi Yang
,
Yi Guo
,
Jiang Bian
,
Yonghui Wu
Contextualized Medication Information Extraction Using Transformer-based Deep Learning Architectures.
CoRR
(2023)
Zhaoyi Chen
,
Yuchen Yang
,
Dazheng Zhang
,
Jingchuan Guo
,
Yi Guo
,
Xia Hu
,
Yong Chen
,
Jiang Bian
Predicting the Risk of Alzheimer's Disease and Related Dementia in Patients with Mild Cognitive Impairment Using a Semi-Competing Risk Approach.
Informatics
10 (2) (2023)
Cheng Peng
,
Xi Yang
,
Aokun Chen
,
Kaleb E. Smith
,
Nima M. Pournejatian
,
Anthony B. Costa
,
Cheryl Martin
,
Mona G. Flores
,
Ying Zhang
,
Tanja Magoc
,
Gloria P. Lipori
,
Duane A. Mitchell
,
Naykky Singh Ospina
,
Mustafa M. Ahmed
,
William R. Hogan
,
Elizabeth A. Shenkman
,
Yi Guo
,
Jiang Bian
,
Yonghui Wu
A study of generative large language model for medical research and healthcare.
npj Digit. Medicine
6 (2023)
Aokun Chen
,
Qian Li
,
Xing He
,
Michael Jaffee
,
William R. Hogan
,
Fei Wang
,
Yi Guo
,
Jiang Bian
Impacts of Eligibility Criteria on Trial Participants' Age in Alzheimer's Disease Clinical Trials.
AMIA
(2022)
Yunpeng Zhao
,
Xing He
,
Zheng Feng
,
Sarah Bost
,
Mattia C. F. Prosperi
,
Yonghui Wu
,
Yi Guo
,
Jiang Bian
Biases in using social media data for public health surveillance: A scoping review.
Int. J. Medical Informatics
164 (2022)
Hansi Zhang
,
Tianchen Lyu
,
Pengfei Yin
,
Sarah Bost
,
Xing He
,
Yi Guo
,
Mattia C. F. Prosperi
,
Willian R. Hogan
,
Jiang Bian
A scoping review of semantic integration of health data and information.
Int. J. Medical Informatics
165 (2022)
Zehao Yu
,
Xi Yang
,
Chong Dang
,
Prakash Adekkanattu
,
Braja Gopal Patra
,
Yifan Peng
,
Jyotishman Pathak
,
Debbie L. Wilson
,
Ching-Yuan Chang
,
Wei-Hsuan Lo-Ciganic
,
Thomas J. George
,
William R. Hogan
,
Yi Guo
,
Jiang Bian
,
Yonghui Wu
SODA: A Natural Language Processing Package to Extract Social Determinants of Health for Cancer Studies.
CoRR
(2022)
Shantanu Ghosh
,
Jiang Bian
,
Yi Guo
,
Mattia C. F. Prosperi
Deep propensity network using a sparse autoencoder for estimation of treatment effects.
J. Am. Medical Informatics Assoc.
28 (6) (2021)
Yi Guo
,
Yahan Zhang
,
Tianchen Lyu
,
Mattia C. F. Prosperi
,
Fei Wang
,
Hua Xu
,
Jiang Bian
The application of artificial intelligence and data integration in COVID-19 studies: a scoping review.
J. Am. Medical Informatics Assoc.
28 (9) (2021)
Zhaoyi Chen
,
Hansi Zhang
,
Yi Guo
,
Thomas J. George
,
Mattia C. F. Prosperi
,
William R. Hogan
,
Zhe He
,
Elizabeth A. Shenkman
,
Fei Wang
,
Jiang Bian
Exploring the feasibility of using real-world data from a large clinical data research network to simulate clinical trials of Alzheimer's disease.
npj Digit. Medicine
4 (2021)
Shubo Tian
,
Arslan Erdengasileng
,
Xi Yang
,
Yi Guo
,
Yonghui Wu
,
Jinfeng Zhang
,
Jiang Bian
,
Zhe He
Transformer-based named entity recognition for parsing clinical trial eligibility criteria.
BCB
(2021)
Zehao Yu
,
Xi Yang
,
Chong Dang
,
Songzi Wu
,
Prakash Adekkanattu
,
Jyotishman Pathak
,
Thomas J. George
,
William R. Hogan
,
Yi Guo
,
Jiang Bian
,
Yonghui Wu
A Study of Social and Behavioral Determinants of Health in Lung Cancer Patients Using Transformers-based Natural Language Processing Models.
AMIA
(2021)
Xi Yang
,
Zehao Yu
,
Yi Guo
,
Jiang Bian
,
Yonghui Wu
Clinical Relation Extraction Using Transformer-based Models.
CoRR
(2021)
Mattia C. F. Prosperi
,
Yi Guo
,
Jiang Bian
Bagged random causal networks for interventional queries on observational biomedical datasets.
J. Biomed. Informatics
115 (2021)
Yunpeng Zhao
,
Pengfei Yin
,
Yongqiu Li
,
Xing He
,
Jingcheng Du
,
Cui Tao
,
Yi Guo
,
Mattia C. F. Prosperi
,
Pierangelo Veltri
,
Xi Yang
,
Yonghui Wu
,
Jiang Bian
Data and Model Biases in Social Media Analyses: A Case Study of COVID-19 Tweets.
AMIA
(2021)
Xi Yang
,
Hanyuan Yang
,
Tianchen Lyu
,
Shuang Yang
,
Yi Guo
,
Jiang Bian
,
Hua Xu
,
Yonghui Wu
A Natural Language Processing Tool to Extract Quantitative Smoking Status from Clinical Narratives.
ICHI
(2020)
Hansi Zhang
,
Christopher Wheldon
,
Adam G. Dunn
,
Cui Tao
,
Jinhai Huo
,
Rui Zhang
,
Mattia C. F. Prosperi
,
Yi Guo
,
Jiang Bian
Mining Twitter to assess the determinants of health behavior toward human papillomavirus vaccination in the United States.
J. Am. Medical Informatics Assoc.
27 (2) (2020)
Yi Guo
,
Jiang Bian
,
François Modave
,
Qian Li
,
Thomas J. George
,
Mattia C. F. Prosperi
,
Elizabeth Shenkman
Assessing the effect of data integration on predictive ability of cancer survival models.
Health Informatics J.
26 (1) (2020)
Yi Guo
,
Xing He
,
Tianchen Lyu
,
Hansi Zhang
,
Yonghui Wu
,
Xi Yang
,
Zhaoyi Chen
,
Merry J. Markham
,
François Modave
,
Mengjun Xie
,
William R. Hogan
,
Christopher A. Harle
,
Elizabeth Shenkman
,
Jiang Bian
Developing and Validating a Computable Phenotype for the Identification of Transgender and Gender Nonconforming Individuals and Subgroups.
AMIA
(2020)
Qian Li
,
Yi Guo
,
Zhe He
,
Hansi Zhang
,
Thomas J. George
,
Jiang Bian
Using Real-World Data to Rationalize Clinical Trials Eligibility Criteria: a case study on Alzheimer's Disease and Donepezil.
AMIA
(2020)
Hansi Zhang
,
Yi Guo
,
Mattia C. F. Prosperi
,
Jiang Bian
An ontology-based documentation of data discovery and integration process in cancer outcomes research.
BMC Medical Informatics Decis. Mak.
(4) (2020)
Yunpeng Zhao
,
Mattia C. F. Prosperi
,
Tianchen Lyu
,
Yi Guo
,
Jiang Bian
Integrating Crowdsourcing and Active Learning for Classification of Work-Life Events from Tweets.
CoRR
(2020)
Yunpeng Zhao
,
Yi Guo
,
Xing He
,
Yonghui Wu
,
Xi Yang
,
Mattia C. F. Prosperi
,
Yanghua Jin
,
Jiang Bian
Assessing mental health signals among sexual and gender minorities using Twitter data.
Health Informatics J.
26 (2) (2020)
Yunpeng Zhao
,
Mattia C. F. Prosperi
,
Tianchen Lyu
,
Yi Guo
,
Le Zhou
,
Jiang Bian
Integrating Crowdsourcing and Active Learning for Classification of Work-Life Events from Tweets.
IEA/AIE
(2020)
Jiang Bian
,
Tianchen Lyu
,
Alexander Loiacono
,
Tonatiuh Mendoza Viramontes
,
Gloria P. Lipori
,
Yi Guo
,
Yonghui Wu
,
Mattia C. F. Prosperi
,
Thomas J. George
,
Christopher A. Harle
,
Elizabeth A. Shenkman
,
William R. Hogan
Assessing the practice of data quality evaluation in a national clinical data research network through a systematic scoping review in the era of real-world data.
J. Am. Medical Informatics Assoc.
27 (12) (2020)
Mattia C. F. Prosperi
,
Yi Guo
,
Matthew Sperrin
,
James S. Koopman
,
Jae S. Min
,
Xing He
,
Shannan N. Rich
,
Mo Wang
,
Iain E. Buchan
,
Jiang Bian
Causal inference and counterfactual prediction in machine learning for actionable healthcare.
Nat. Mach. Intell.
2 (7) (2020)
Xing He
,
Rui Zhang
,
Rubina F. Rizvi
,
Jake Vasilakes
,
Xi Yang
,
Yi Guo
,
Zhe He
,
Mattia C. F. Prosperi
,
Jinhai Huo
,
Jordan Alpert
,
Jiang Bian
ALOHA: developing an interactive graph-based visualization for dietary supplement knowledge graph through user-centered design.
BMC Medical Informatics Decis. Mak.
(4) (2019)
Yunpeng Zhao
,
Jinhai Huo
,
Mattia C. F. Prosperi
,
Yi Guo
,
Yongqiu Li
,
Jiang Bian
Exploring Lung Cancer Screening Discussions on Twitter.
MedInfo
(2019)
François Modave
,
Yunpeng Zhao
,
Janice L. Krieger
,
Zhe He
,
Yi Guo
,
Jinhai Huo
,
Mattia C. F. Prosperi
,
Jiang Bian
Understanding Perceptions and Attitudes in Breast Cancer Discussions on Twitter.
CoRR
(2019)
Qian Li
,
Zhe He
,
Yi Guo
,
Hansi Zhang
,
Thomas J. George
,
William R. Hogan
,
Neil Charness
,
Jiang Bian
Assessing the Validity of a a priori Patient-Trial Generalizability Score using Real-world Data from a Large Clinical Data Research Network: A Colorectal Cancer Clinical Trial Case Study.
AMIA
(2019)
Xing He
,
Hansi Zhang
,
Xi Yang
,
Yi Guo
,
Jiang Bian
STAT: A Web-based Semantic Text Annotation Tool to Assist Building Mental Health Knowledge Base.
ICHI
(2019)
François Modave
,
Yunpeng Zhao
,
Janice L. Krieger
,
Zhe He
,
Yi Guo
,
Jinhai Huo
,
Mattia C. F. Prosperi
,
Jiang Bian
Understanding Perceptions and Attitudes in Breast Cancer Discussions on Twitter.
MedInfo
(2019)
Hansi Zhang
,
Christopher Wheldon
,
Adam G. Dunn
,
Cui Tao
,
Jinhai Huo
,
Rui Zhang
,
Mattia C. F. Prosperi
,
Yi Guo
,
Jiang Bian
Mining Twitter to Assess the Determinants of Health Behavior towards Human Papillomavirus Vaccination in the United States.
CoRR
(2019)
Hansi Zhang
,
Yi Guo
,
Jiang Bian
Ontology for Documentation of Variable and Data Source Selection Process to Support Integrative Data Analysis in Cancer Outcomes Research.
SEPDA@ISWC
(2019)
Hansi Zhang
,
Yi Guo
,
Qian Li
,
Thomas J. George
,
Elizabeth Shenkman
,
François Modave
,
Jiang Bian
An ontology-guided semantic data integration framework to support integrative data analysis of cancer survival.
BMC Medical Informatics Decis. Mak.
18 (S-2) (2018)
Xing He
,
Rui Zhang
,
Rubina F. Rizvi
,
Jake Vasilakes
,
Xi Yang
,
Yi Guo
,
Zhe He
,
Mattia C. F. Prosperi
,
Jiang Bian
Prototyping an Interactive Visualization of Dietary Supplement Knowledge Graph.
BIBM
(2018)
Yunpeng Zhao
,
Yi Guo
,
Xing He
,
Jinhai Huo
,
Yonghui Wu
,
Xi Yang
,
Jiang Bian
Assessing Mental Health Signals Among Sexual and Gender Minorities using Twitter Data.
ICHI Workshops
(2018)
Yonghui Wu
,
Xi Yang
,
Jiang Bian
,
Yi Guo
,
Hua Xu
,
William R. Hogan
Combine Factual Medical Knowledge and Distributed Word Representation to Improve Clinical Named Entity Recognition.
AMIA
(2018)
Juan Antonio Lossio-Ventura
,
William R. Hogan
,
François Modave
,
Yi Guo
,
Zhe He
,
Xi Yang
,
Hansi Zhang
,
Jiang Bian
OC-2-KB: integrating crowdsourcing into an obesity and cancer knowledge base curation system.
BMC Medical Informatics Decis. Mak.
18 (S-2) (2018)
Hansi Zhang
,
Zhe He
,
Xing He
,
Yi Guo
,
David R. Nelson
,
François Modave
,
Yonghui Wu
,
William R. Hogan
,
Mattia C. F. Prosperi
,
Jiang Bian
Computable Eligibility Criteria through Ontology-driven Data Access: A Case Study of Hepatitis C Virus Trials.
AMIA
(2018)
Hansi Zhang
,
Yunpeng Zhao
,
Christopher Wheldon
,
Xinsong Du
,
Terrell Brown
,
Yi Guo
,
Stephanie Staras
,
Jingcheng Du
,
Cui Tao
,
Jiang Bian
A Twitter Study of the Relationship between the Geographic Variations of HPV Vaccination Rates and Online Information in the United States.
AMIA
(2017)
Zhe He
,
Arturo Gonzalez-Izquierdo
,
Spiros C. Denaxas
,
Andrei Sura
,
Yi Guo
,
William R. Hogan
,
Elizabeth Shenkman
,
Jiang Bian
Comparing and Contrasting A Priori and A Posteriori Generalizability Assessment of Clinical Trials on Type 2 Diabetes Mellitus.
AMIA
(2017)
Juan Antonio Lossio-Ventura
,
William R. Hogan
,
François Modave
,
Amanda Hicks
,
Yi Guo
,
Zhe He
,
Mirela Vasconcelos
,
Jiang Bian
Building an Obesity and Cancer Semantic Web Knowledge Base.
AMIA
(2017)
Tianyao Huo
,
Thomas J. George Jr.
,
Yi Guo
,
Zhe He
,
Mattia C. F. Prosperi
,
François Modave
,
Jiang Bian
Explore Care Pathways of Colorectal Cancer Patients with Social Network Analysis.
MedInfo
(2017)
Jiawei Yuan
,
Bradley A. Malin
,
François Modave
,
Yi Guo
,
William R. Hogan
,
Elizabeth Shenkman
,
Jiang Bian
Towards a privacy preserving cohort discovery framework for clinical research networks.
J. Biomed. Informatics
66 (2017)
Hansi Zhang
,
Yi Guo
,
Qian Li
,
Thomas J. George
,
Elizabeth A. Shenkman
,
Jiang Bian
Data integration through ontology-based data access to support integrative data analysis: A case study of cancer survival.
BIBM
(2017)
Juan Antonio Lossio-Ventura
,
William R. Hogan
,
François Modave
,
Yi Guo
,
Zhe He
,
Amanda Hicks
,
Jiang Bian
OC-2-KB: A software pipeline to build an evidence-based obesity and cancer knowledge base.
BIBM
(2017)
Dharani K. Balasubramanian
,
Jamillah Z. Khan
,
Jiang Bian
,
Yi Guo
,
William R. Hogan
,
Amanda Hicks
Ontology of Cancer Related Social-Ecological Variables.
ICBO
(2017)
Jiang Bian
,
Andrei Sura
,
Gloria P. Lipori
,
Yi Guo
,
François Modave
,
Zhe He
,
Elizabeth Shenkman
,
William R. Hogan
Implementing a Hash-based Privacy-Preserving Entity Resolution Tool in the OneFlorida Clinical Data Research Network.
AMIA
(2017)
Juan Antonio Lossio-Ventura
,
William R. Hogan
,
François Modave
,
Amanda Hicks
,
Josh Hanna
,
Yi Guo
,
Zhe He
,
Jiang Bian
Towards an obesity-cancer knowledge base: Biomedical entity identification and relation detection.
BIBM
(2016)
Cilia E. Zayas
,
Zhe He
,
Jiawei Yuan
,
Mildred Maldonado-Molina
,
William R. Hogan
,
François Modave
,
Yi Guo
,
Jiang Bian
Examining Healthcare Utilization Patterns of Elderly and Middle-Aged Adults in the United States.
FLAIRS Conference
(2016)