Yanju Zhang

Publication Activity (10 Years)

Years Active: 2005-2024
Publications (10 Years): 14

Top Topics

Redescription Mining

Collaborative Filtering Recommendation Algorithm

Gradient Boosting

Top Venues

Nucleic Acids Res.

Briefings Bioinform.

Publications

Rongxing Wang, Yanju Zhang
Accelerating spliced alignment of long RNA sequencing reads using parallel maximal exact match retrieval. Comput. Biol. Medicine 175 (2024)
Xiaobin Lan, Jiaming Mei, Ruohan Lin, Jiahao Chen, Yanju Zhang
A Weakly Supervised Semantic Segmentation Method on Lung Adenocarcinoma Histopathology Images. ICIC (2) (2023)
Yanju Zhang, Wangjing Qi, Ruohan Lin, Jinli Fan
SpliceCannon: A novel framework for the prediction of canonical and non-canonical splice sites based on deep learning. BIBM (2023)
Rongxing Wang, Junwei Xu, Xiaodi Huang, Wangjing Qi, Yanju Zhang
SpliceSCANNER: An Accurate and Interpretable Deep Learning-Based Method for Splice Site Prediction. ICIC (3) (2023)
Xiaohan Sun, Yanju Zhang, Xiaobin Huang, Fangzhou Wang, Zugang Mo
Vehicle Violation Detection System Based on Improved YOLOv5 Algorithm. CIS (2022)
Jiawei Wang, Wei Dai, Jiahui Li, Qi Li, Ruopeng Xie, Yanju Zhang, Christopher Stubenrauch, Trevor Lithgow
AcrHub: an integrative hub for investigating, predicting and mapping anti-CRISPR proteins. Nucleic Acids Res. 49 (Database-Issue) (2021)
Jiawei Wang, Jiahui Li, Yi Hou, Wei Dai, Ruopeng Xie, Tatiana T. Marquez-Lago, André Leier, Tieli Zhou, Von Torres, Iain Hay, Christopher Stubenrauch, Yanju Zhang, Jiangning Song, Trevor Lithgow
BastionHub: a universal platform for integrating and analyzing substrates secreted by Gram-negative bacteria. Nucleic Acids Res. 49 (Database-Issue) (2021)
Ruopeng Xie, Jiahui Li, Jiawei Wang, Wei Dai, André Leier, Tatiana T. Marquez-Lago, Tatsuya Akutsu, Trevor Lithgow, Jiangning Song, Yanju Zhang
DeepVF: a deep learning-based hybrid framework for identifying virulence factors using the stacking strategy. Briefings Bioinform. 22 (3) (2021)
Jiawei Wang, Wei Dai, Jiahui Li, Ruopeng Xie, Rhys A. Dunstan, Christopher Stubenrauch, Yanju Zhang, Trevor Lithgow
PaCRISPR: a server for predicting and visualizing anti-CRISPR proteins. Nucleic Acids Res. 48 (Webserver-Issue) (2020)
Yanju Zhang, Sha Yu, Ruopeng Xie, Jiahui Li, André Leier, Tatiana T. Marquez-Lago, Tatsuya Akutsu, Alexander Ian Smith, Zongyuan Ge, Jiawei Wang, Trevor Lithgow, Jiangning Song
PeNGaRoo, a combined gradient boosting and ensemble learning framework for predicting non-classical secreted proteins. Bioinform. 36 (3) (2020)
Yanju Zhang, Yue Wang, Shiqin Wang
Improvement of Collaborative Filtering Recommendation Algorithm Based on Intuitionistic Fuzzy Reasoning Under Missing Data. IEEE Access 8 (2020)
Yanju Zhang, Ruopeng Xie, Jiawei Wang, André Leier, Tatiana T. Marquez-Lago, Tatsuya Akutsu, Geoffrey I. Webb, Kuo-Chen Chou, Jiangning Song
Computational analysis and prediction of lysine malonylation sites by exploiting informative features in an integrative machine-learning framework. Briefings Bioinform. 20 (6) (2019)
Jiawei Wang, Jiahui Li, Bingjiao Yang, Ruopeng Xie, Tatiana T. Marquez-Lago, André Leier, Morihiro Hayashida, Tatsuya Akutsu, Yanju Zhang, Kuo-Chen Chou, Joel Selkrig, Tieli Zhou, Jiangning Song, Trevor Lithgow
Bastion3: a two-layer ensemble predictor of type III secreted effectors. Bioinform. 35 (12) (2019)
Jiawei Wang, Bingjiao Yang, André Leier, Tatiana T. Marquez-Lago, Morihiro Hayashida, Andrea Rocker, Yanju Zhang, Tatsuya Akutsu, Kuo-Chen Chou, Richard A. Strugnell, Jiangning Song, Trevor Lithgow
Bastion6: a bioinformatics approach for accurate prediction of type VI secreted effectors. Bioinform. 34 (15) (2018)
Yanju Zhang, Eric-Wubbo Lameijer, Peter A. C. 't Hoen, Zemin Ning, P. Eline Slagboom, Kai Ye
PASSion: a pattern growth algorithm-based pipeline for splice junction detection in paired-end RNA-Seq data. Bioinform. 28 (4) (2012)
Yanju Zhang, Elia Stupka, Christiaan V. Henkel, Hans J. Jansen, Herman P. Spaink, Fons J. Verbeek
Identification of Common Carp Innate Immune Genes with Whole-Genome Sequencing and RNA-Seq Data. J. Integr. Bioinform. 8 (2) (2011)
Yanju Zhang, Fons J. Verbeek
Comparison and Integration of Target Prediction Algorithms for microRNA Studies. J. Integr. Bioinform. 7 (3) (2010)
Yanju Zhang, Jeroen S. de Bruin, Fons J. Verbeek
miRNA target prediction through mining of miRNA relationships. BIBE (2008)
Gihan Dawelbait, Christof Winter, Yanju Zhang, Christian Pilarsky, Robert Grützmann, Jörg-Christian Heinrich, Michael Schroeder
Structural templates predict novel protein interactions and targets from pancreas tumour gene expression data. ISMB/ECCB (Supplement of Bioinformatics) (2007)
Gihan Dawelbait, Christian Pilarsky, Yanju Zhang, Robert Grützmann, Michael Schroeder
Structural Protein Interactions Predict Kinase-Inhibitor Interactions in Upregulated Pancreas Tumour Genes Expression Data. CompLife (2005)