Accelerating spliced alignment of long RNA sequencing reads using parallel maximal exact match retrieval.
Rongxing WangYanju ZhangPublished in: Comput. Biol. Medicine (2024)
Keyphrases
- exact match
- ranked retrieval
- high recall
- alternative splicing
- rna seq
- similarity search
- high throughput sequencing
- high precision
- range queries
- genome wide
- information retrieval
- keywords
- sequence data
- rna secondary structures
- rna sequences
- distributed information retrieval
- web pages
- selection algorithm
- information retrieval systems
- knn
- database systems
- multimedia