Xiaohua Wan

Publication Activity (10 Years)

Years Active: 2009-2024
Publications (10 Years): 33

Top Topics

Moment Invariants

Scheduling Algorithm

Electron Microscope

Top Venues

J. Comput. Biol.

Publications

Yaoyu Wang, Xiaohua Wan, Cheng Chen, Fa Zhang, Xuefeng Cui
Central Feature Network Enables Accurate Detection of Both Small and Large Particles in Cryo-Electron Tomography. ISBRA (1) (2024)
Shuang Feng, Letian Wang, Chang Li, Xiaohua Wan, Fa Zhang, Bin Hu
IG-GRD: A Model Based on Disentangled Graph Representation Learning for Imaging Genetic Data Fusion. ICIC (2) (2024)
Zi-Ang Fu, Xiaohua Wan, Fa Zhang
GPU Optimization of Biological Macromolecule Multi-tilt Electron Tomography Reconstruction Algorithm. ICIC (3) (2023)
Yulong Hu, Dehui Qiu, Xiaohua Wan, Juan Zhang, Xiaotong Wang, Fa Zhang, Bin Hu
A Tongue Feature Extraction Method Based on a Sublingual Vein Segmentation. BIBM (2023)
Dehui Qiu, Xinyue Zhang, Xiaohua Wan, Jiacheng Li, Ziheng Xu, Senlin Lin, Fa Zhang, Xuekun Song, Rui Zhang, Yulong Chen, Yuling Zheng
A novel tongue feature extraction method on mobile devices. Biomed. Signal Process. Control. 80 (Part) (2023)
Wenjing Zhang, Dehui Qiu, Xiaohua Wan, Fa Zhang, Huimei Yuan
A Novel Impervious Surface Extraction Method Based on Transformer. IGARSS (2023)
Shuo Li, Hongjia Li, Chi Zhang, Fa Zhang, Xiaohua Wan
A Segmentation-aware Synergy Network for Single Particle Recognition in Cryo-EM. BIBM (2022)
Hongjia Li, Hui Zhang, Xiaohua Wan, Zhidong Yang, Chengmin Li, Jintao Li, Renmin Han, Ping Zhu, Fa Zhang
Noise-Transfer2Clean: denoising cryo-EM images based on noise modeling and transfer. Bioinform. 38 (7) (2022)
Fangyuan Zhao, Xiaohua Wan, Sijia Li, Zhongchang Sun, Wenjing Zhang, Dehui Qiu, Fa Zhang, Xinyu Liu, Guangming Tan
CSAM: A Channel and Spatial Attention Mechanism for Impervious Surface Extraction in Difficult Areas. IGARSS (2022)
Ziheng Xu, Dehui Qiu, Senlin Lin, Xinyue Zhang, Sheng Shi, Shengtao Zhu, Fa Zhang, Xiaohua Wan
Temporal Correlation Network for Video Polyp Segmentation. BIBM (2022)
Hongjia Li, Ge Chen, Shan Gao, Jintao Li, Xiaohua Wan, Fa Zhang
A Transfer Learning-Based Classification Model for Particle Pruning in Cryo-Electron Microscopy. J. Comput. Biol. 29 (10) (2022)
Yu Hao, Xiaohua Wan, Rui Yan, Zhiyong Liu, Jintao Li, Shihua Zhang, Xuefeng Cui, Fa Zhang
VP-Detector: A 3D multi-scale dense convolutional neural network for macromolecule localization and classification in cryo-electron tomograms. Comput. Methods Programs Biomed. 221 (2022)
Chi Zhang, Hongjia Li, Xiaohua Wan, Xuemei Chen, Zhenghe Yang, Jieqing Feng, Fa Zhang
TransPicker: a Transformer-based Framework for Particle Picking in cryoEM Micrographs. BIBM (2021)
Penglei Song, Ce Chi, Kaixuan Ji, Zhiyong Liu, Fa Zhang, Shikui Zhang, Dehui Qiu, Xiaohua Wan
A Deep Reinforcement Learning-based Task Scheduling Algorithm for Energy Efficiency in Data Centers. ICCCN (2021)
Zihao Yang, Zhaobin Cao, Xiaohua Wan, Fa Zhang, Guangming Tan
Spatio-Temporal Features Processing Network for Change Detection in Remote Sensing Images. IGARSS (2021)
Enze Zhang, Boheng Zhang, Shaohan Hu, Fa Zhang, Zhiyong Liu, Xiaohua Wan
Multi-labelled proteins recognition for high-throughput microscopy images using deep convolutional neural networks. BMC Bioinform. (3) (2021)
Shikui Zhang, Ce Chi, Kaixuan Ji, Zhiyong Liu, Fa Zhang, Penglei Song, Huimei Yuan, Dehui Qiu, Xiaohua Wan
A new meta-heuristic task scheduling algorithm for optimizing energy efficiency in data centers. ISPA/BDCloud/SocialCom/SustainCom (2021)
Senlin Lin, Xuekun Song, Ziheng Xu, Xinyue Zhang, Yinqing Lin, Rui Zhang, Yulong Chen, Fa Zhang, Dehui Qiu, Yuling Zheng, Xiaohua Wan
Moment Invariants with Data Augmentation for Tongue Image Segmentation. BIBM (2021)
Zihao Wang, Xiaohua Wan, Zhiyong Liu, Qianshuo Fan, Fa Zhang, Guangming Tan
A Multi-GPU Design for Large Size Cryo-EM 3D Reconstruction. IPDPS (2021)
Zihao Wang, Jingrong Zhang, Weifang Gao, Zhiyong Liu, Xiaohua Wan, Fa Zhang
A Consensus Framework of Distributed Multiple-Tilt Reconstruction in Electron Tomography. J. Comput. Biol. 27 (2) (2020)
Qin Zhang, Li Zha, Xiaohua Wan, Boqun Cheng
A GPU Inference System Scheduling Algorithm with Asynchronous Data Transfer. IPDPS Workshops (2019)
Enze Zhang, Boheng Zhang, Shaohan Hu, Fa Zhang, Xiaohua Wan
Classifying Mixed Patterns of Proteins in High-Throughput Microscopy Images Using Deep Neural Networks. ICIC (1) (2019)
Zhilong Lv, Rui Yan, Xinyu Liu, Zhongke Wu, Yicheng Zhu, Shiwei Sun, Fa Zhang, Xingce Wang, Xiaohua Wan
Cerebrovascular Segmentation Algorithm Based on Focused Multi-Gaussians Model and Weighted 3D Markov Random Field. BIBM (2019)
Renmin Han, Xiaohua Wan, Lun Li, Albert F. Lawrence, Peng Yang, Yu Li, Sheng Wang, Fei Sun, Zhiyong Liu, Xin Gao, Fa Zhang
AuTom-dualx: a toolkit for fully automatic fiducial marker-based alignment of dual-axis tilt series with simultaneous reconstruction. Bioinform. 35 (2) (2019)
Zihao Wang, Jingrong Zhang, Xintong Liu, Zhiyong Liu, Xiaohua Wan, Fa Zhang
DM-SIRT: A Distributed Method for Multi-tilt Reconstruction in Electron Tomography. ISBRA (2019)
Zihao Wang, Mingzhe Zhang, Jingrong Zhang, Rui Yan, Xiaohua Wan, Zhiyong Liu, Fa Zhang, Xuefeng Cui
Mmalloc: A Dynamic Memory Management on Many-core Coprocessor for the Acceleration of Storage-intensive Bioinformatics Application. BIBM (2018)
Yu Hao, Renmin Han, Xiaohua Wan, Fa Zhang, Shiwei Sun
Fiducial marker detection via deep learning approach for electron tomography. BIBM (2018)
Zihao Wang, Yu Chen, Jingrong Zhang, Lun Li, Xiaohua Wan, Zhiyong Liu, Fei Sun, Fa Zhang
ICON-MIC: Implementing a CPU/MIC Collaboration Parallel Framework for ICON on Tianhe-2 Supercomputer. J. Comput. Biol. 25 (3) (2018)
Enze Zhang, Fa Zhang, Zhiyong Liu, Xiaohua Wan, Lifa Zhu
SegET: Deep Neural Network with Rich Contextual Features for Cellular Structures Segmentation in Electron Tomography Image. CoRR (2018)
Fa Zhang, Yu Chen, Fei Ren, Xuan Wang, Zhiyong Liu, Xiaohua Wan
A Two-Phase Improved Correlation Method for Automatic Particle Selection in Cryo-EM. IEEE ACM Trans. Comput. Biol. Bioinform. 14 (2) (2017)
Yu Chen, Zihao Wang, Lun Li, Xiaohua Wan, Fei Sun, Fa Zhang
A Fully Automatic Geometric Parameters Determining Method for Electron Tomography. ISBRA (2017)
Zihao Wang, Yu Chen, Jingrong Zhang, Lun Li, Xiaohua Wan, Zhiyong Liu, Fei Sun, Fa Zhang
Accelerating Electron Tomography Reconstruction Algorithm ICON Using the Intel Xeon Phi Coprocessor on Tianhe-2 Supercomputer. ISBRA (2017)
Xiujuan Sun, Fa Zhang, Xiaohua Wan, Jinzhi Zhang
aWGRS: Automates paired-end whole genome re-sequencing data analysis framework. BIBM (2016)
Jingrong Zhang, Xiaohua Wan, Fa Zhang, Fei Ren, Xuan Wang, Zhiyong Liu
A Parallel Scheme for Three-Dimensional Reconstruction in Large-Field Electron Tomography. ISBRA (2014)
Yu Chen, Fei Ren, Xiaohua Wan, Xuan Wang, Fa Zhang
An Improved Correlation Method Based on Rotation Invariant Feature for Automatic Particle Selection. ISBRA (2014)
Ruijuan Chen, Xiaohua Wan, Ilkay Altintas, Jianwu Wang, Daniel Crawl, Sebastien Phan, Albert F. Lawrence, Mark H. Ellisman
EPiK-a Workflow for Electron Tomography in Kepler. ICCS (2014)
Xiaohua Wan, Sebastien Phan, Albert F. Lawrence, Fa Zhang, Renmin Han, Zhiyong Liu, Mark H. Ellisman
Iterative Methods in Large Field Electron Microscope Tomography. SIAM J. Sci. Comput. 35 (5) (2013)
Xiaohua Wan, Fa Zhang, Qi Chu, Zhiyong Liu
High-performance blob-based iterative three-dimensional reconstruction in electron tomography using multi-GPUs. BMC Bioinform. 13 (S-10) (2012)
Xiaohua Wan, Fa Zhang, Qi Chu, Zhiyong Liu
High-Performance Blob-Based Iterative Reconstruction of Electron Tomography on Multi-GPUs. ISBRA (2011)
Qi Chu, Fa Zhang, Kai Zhang, Xiaohua Wan, Mingwei Chen, Zhiyong Liu
An accurate, automatic method for markerless alignment of electron tomographic images. BIBM (2010)
Xiaohua Wan, Fa Zhang, Zhiyong Liu
Modified Simultaneous Algebraic Reconstruction Technique and its Parallelization in Cryo-electron Tomography. ICPADS (2009)