Renmin Han

Publication Activity (10 Years)

Years Active: 2010-2024
Publications (10 Years): 28

Top Topics

Image Reconstruction

Bayesian Inference

Fluorescence Microscopy

Top Venues

Publications

Junhai Qi, Chenjie Feng, Yulin Shi, Jianyi Yang, Fa Zhang, Guojun Li, Renmin Han
FP-Zernike: An Open-source Structural Database Construction Toolkit for Fast Structure Retrieval. Genom. Proteom. Bioinform. 22 (1) (2024)
Zhidong Yang, Hongjia Li, Dawei Zang, Renmin Han, Fa Zhang
Improved Denoising of Cryo-Electron Microscopy Micrographs with Simulation-Aware Pretraining. J. Comput. Biol. 31 (6) (2024)
Tianyang Xue, Lin Lu, Yang Liu, Mingdong Wu, Hao Dong, Yanbin Zhang, Renmin Han, Baoquan Chen
GFPack++: Improving 2D Irregular Packing by Learning Gradient Field with Attention. CoRR (2024)
Junchi Ma, Xiaoyu Zhao, Enfeng Qi, Renmin Han, Ting Yu, Guojun Li
Highly efficient clustering of long-read transcriptomic data with GeLuster. Bioinform. 40 (2) (2024)
Zhidong Yang, Hongjia Li, Dawei Zang, Renmin Han, Fa Zhang
SaID: Simulation-Aware Image Denoising Pre-trained Model for Cryo-EM Micrographs. ISBRA (2023)
Bintao He, Fa Zhang, Chenjie Feng, Jianyi Yang, Xin Gao, Renmin Han
CryoAlign: feature-based method for global and local 3D alignment of EM density maps. CoRR (2023)
Zhao Zhang, Xia Yan, Piyang Liu, Kai Zhang, Renmin Han, Sheng Wang
A physics-informed convolutional neural network for the simulation and prediction of two-phase Darcy flows in heterogeneous porous media. J. Comput. Phys. 477 (2023)
Hongjia Li, Hui Zhang, Xiaohua Wan, Zhidong Yang, Chengmin Li, Jintao Li, Renmin Han, Ping Zhu, Fa Zhang
Noise-Transfer2Clean: denoising cryo-EM images based on noise modeling and transfer. Bioinform. 38 (7) (2022)
Bintao He, Yan Zhang, Fa Zhang, Renmin Han
Correction of image distortion in large-field ssEM stitching by an unsupervised intermediate-space solving network. Bioinform. 38 (20) (2022)
Shan Gao, Renmin Han, Xiangrui Zeng, Zhiyong Liu, Min Xu, Fa Zhang
Macromolecules Structural Classification With a 3D Dilated Dense Network in Cryo-Electron Tomography. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (1) (2022)
Lifa Zhu, Haining Guan, Changwei Lin, Renmin Han
Neighborhood-aware Geometric Encoding Network for Point Cloud Registration. CoRR (2022)
Zhidong Yang, Fa Zhang, Renmin Han
Self-Supervised Cryo-Electron Tomography Volumetric Image Restoration from Single Noisy Volume with Sparsity Constraint. ICCV (2021)
Renmin Han, Guojun Li, Xin Gao
Robust and ultrafast fiducial marker correspondence in electron tomography by a two-stage algorithm considering local constraints. Bioinform. 37 (1) (2021)
Renmin Han, Lun Li, Peng Yang, Fa Zhang, Xin Gao
A novel constrained reconstruction model towards high-resolution subtomogram averaging. Bioinform. 37 (11) (2021)
Bintao He, Fa Zhang, Huanshui Zhang, Renmin Han
A Hybrid Frequency-Spatial Domain Model for Sparse Image Reconstruction in Scanning Transmission Electron Microscopy. ICCV (2021)
Ting Yu, Renmin Han, Zhaoyuan Fang, Zengchao Mu, Hongyu Zheng, Juntao Liu
TransRef enables accurate transcriptome assembly by redefining accurate neo-splicing graphs. Briefings Bioinform. 22 (6) (2021)
Shan Gao, Renmin Han, Xiangrui Zeng, Xuefeng Cui, Zhiyong Liu, Min Xu, Fa Zhang
Dilated-DenseNet for Macromolecule Classification in Cryo-electron Tomography. ISBRA (2020)
Renmin Han, Sheng Wang, Xin Gao
Novel algorithms for efficient subsequence searching and mapping in nanopore raw signals towards targeted sequencing. Bioinform. 36 (5) (2020)
Lun Li, Renmin Han, Zhaotian Zhang, Tiande Guo, Zhiyong Liu, Fa Zhang
Compressed sensing improved iterative reconstruction-reprojection algorithm for electron tomography. BMC Bioinform. (6) (2020)
Jingrong Zhang, Zihao Wang, Yu Chen, Renmin Han, Zhiyong Liu, Fei Sun, Fa Zhang
PIXER: an automated particle-selection method based on segmentation using a deep neural network. BMC Bioinform. 20 (1) (2019)
Renmin Han, Xiaohua Wan, Lun Li, Albert F. Lawrence, Peng Yang, Yu Li, Sheng Wang, Fei Sun, Zhiyong Liu, Xin Gao, Fa Zhang
AuTom-dualx: a toolkit for fully automatic fiducial marker-based alignment of dual-axis tilt series with simultaneous reconstruction. Bioinform. 35 (2) (2019)
Renmin Han, Zhipeng Bao, Xiangrui Zeng, Tongxin Niu, Fa Zhang, Min Xu, Xin Gao
A joint method for marker-free alignment of tilt series in electron tomography. Bioinform. 35 (14) (2019)
Yu Li, Fan Xu, Fa Zhang, Pingyong Xu, Mingshu Zhang, Ming Fan, Lihua Li, Xin Gao, Renmin Han
DLBI: Deep learning guided Bayesian inference for structure reconstruction of super-resolution fluorescence microscopy. CoRR (2018)
Yu Li, Renmin Han, Chongwei Bi, Mo Li, Sheng Wang, Xin Gao
DeepSimulator: a deep simulator for Nanopore sequencing. Bioinform. 34 (17) (2018)
Yu Li, Fan Xu, Fa Zhang, Pingyong Xu, Mingshu Zhang, Ming Fan, Lihua Li, Xin Gao, Renmin Han
DLBI: deep learning guided Bayesian inference for structure reconstruction of super-resolution fluorescence microscopy. Bioinform. 34 (13) (2018)
Yu Hao, Renmin Han, Xiaohua Wan, Fa Zhang, Shiwei Sun
Fiducial marker detection via deep learning approach for electron tomography. BIBM (2018)
Renmin Han, Yu Li, Xin Gao, Sheng Wang
An accurate and rapid continuous wavelet dynamic time warping algorithm for end-to-end mapping in ultra-long nanopore sequencing. Bioinform. 34 (17) (2018)
Renmin Han, Fa Zhang, Xin Gao
A fast fiducial marker tracking model for fully automatic alignment in electron tomography. Bioinform. 34 (5) (2018)
Xiaohua Wan, Sebastien Phan, Albert F. Lawrence, Fa Zhang, Renmin Han, Zhiyong Liu, Mark H. Ellisman
Iterative Methods in Large Field Electron Microscope Tomography. SIAM J. Sci. Comput. 35 (5) (2013)
Renmin Han, Jun Huang
QoS Routing in General Petersen-Torus Networks: A Case Study. J. Convergence Inf. Technol. 5 (7) (2010)