Xavier Didelot

Publication Activity (10 Years)

Years Active: 2009-2023
Publications (10 Years): 6

Top Topics

Disease Outbreaks

Learning Curves

Top Venues

PLoS Comput. Biol.

Briefings Bioinform.

Publications

Xavier Didelot, David Helekal, Michelle Kendall, Paolo Ribeca
Distinguishing imported cases from locally acquired cases within a geographically limited genomic sample of an infectious disease. Bioinform. 39 (1) (2023)
Liang Wang, Xavier Didelot, Yuhai Bi, George F. Gao
SARS-CoV-2 transmissibility compared between variants of concern and vaccination status. Briefings Bioinform. 23 (2) (2022)
Lilith K. Whittles, Peter J. White, Xavier Didelot
A dynamic power-law sexual network model of gonorrhoea outbreaks. PLoS Comput. Biol. 15 (3) (2019)
Finlay Campbell, Xavier Didelot, Rich Fitzjohn, Neil M. Ferguson, Anne Cori, Thibaut Jombart
outbreaker2: a modular platform for outbreak reconstruction. BMC Bioinform. (11) (2018)
Caitlin Collins, Xavier Didelot
A phylogenetic method to perform genome-wide association studies in microbes that accounts for population structure and recombination. PLoS Comput. Biol. 14 (2) (2018)
Don Klinkenberg, Jantien A. Backer, Xavier Didelot, Caroline Colijn, Jacco Wallinga
Simultaneous inference of phylogenetic and transmission trees in infectious disease outbreaks. PLoS Comput. Biol. 13 (5) (2017)
Xavier Didelot, Daniel J. Wilson
ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes. PLoS Comput. Biol. 11 (2) (2015)
Thibaut Jombart, Anne Cori, Xavier Didelot, Simon Cauchemez, Christophe Fraser, Neil M. Ferguson
Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data. PLoS Comput. Biol. 10 (1) (2014)
Xavier Didelot, Daniel Lawson, Daniel Falush
SimMLST: simulation of multi-locus sequence typing data under a neutral model. Bioinform. 25 (11) (2009)