Christophe Fraser

Publication Activity (10 Years)

Years Active: 2009-2022
Publications (10 Years): 7

Top Topics

Highly Efficient

Disease Outbreaks

Simulation Models

Top Venues

PLoS Comput. Biol.

npj Digit. Medicine

Publications

Christopher E. Overton, Lorenzo Pellis, Helena B. Stage, Francesca Scarabel, Joshua Burton, Christophe Fraser, Ian M. Hall, Thomas A. House, Chris P. Jewell, Anel Nurtay, Filippo Pagani, Katrina A. Lythgoe
EpiBeds: Data informed modelling of the COVID-19 hospital burden in England. PLoS Comput. Biol. 18 (9) (2022)
Michael Pickles, Anne Cori, William J. M. Probert, Rafael Sauter, Robert Hinch, Sarah Fidler, Helen Ayles, Peter Bock, Deborah Donnell, Ethan Wilson, Estelle Piwowar-Manning, Sian Floyd, Richard J. Hayes, Christophe Fraser, HPTN 071 (PopART) Study Team
PopART-IBM, a highly efficient stochastic individual-based simulation model of generalised HIV epidemics developed in the context of the HPTN 071 (PopART) trial. PLoS Comput. Biol. 17 (9) (2021)
Robert Hinch, William J. M. Probert, Anel Nurtay, Michelle Kendall, Chris Wymant, Matthew Hall, Katrina A. Lythgoe, Ana Bulas Cruz, Lele Zhao, Andrea Stewart, Luca Ferretti, Daniel Montero, James Warren, Nicole Mather, Matthew Abueg, Neo Wu, Olivier Legat, Katie Bentley, Thomas Mead, Kelvin Van-Vuuren, Dylan Feldner-Busztin, Tommaso Ristori, Anthony Finkelstein, David G. Bonsall, Lucie Abeler-Dörner, Christophe Fraser
OpenABM-Covid19 - An agent-based model for non-pharmaceutical interventions against COVID-19 including contact tracing. PLoS Comput. Biol. 17 (7) (2021)
Matthew Abueg, Robert Hinch, Neo Wu, Luyang Liu, William J. M. Probert, Austin Wu, Paul Eastham, Yusef Shafi, Matt Rosencrantz, Michael Dikovsky, Zhao Cheng, Anel Nurtay, Lucie Abeler-Dörner, David G. Bonsall, Michael V. McConnell, Shawn O'Banion, Christophe Fraser
Modeling the effect of exposure notification and non-pharmaceutical interventions on COVID-19 transmission in Washington state. npj Digit. Medicine 4 (2021)
Vittoria Colizza, Eva Grill, Rafael T. Mikolajczyk, Ciro Cattuto, Adam J. Kucharski, Steven Riley, Michelle Kendall, Katrina A. Lythgoe, Lucie Abeler-Dörner, Chris Wymant, David Bonsall, Luca Ferretti, Christophe Fraser
Epidemiological and public health requirements for COVID-19 contact tracing apps and their evaluation. CoRR (2021)
Hilje M. Doekes, Christophe Fraser, Katrina A. Lythgoe
Effect of the Latent Reservoir on the Evolution of HIV at the Within- and Between-Host Levels. PLoS Comput. Biol. 13 (1) (2017)
Gytis Dudas, Luiz Max Carvalho, Trevor Bedford, Andrew J. Tatem, Guy Baele, Nuno R. Faria, Daniel J. Park, Jason T. Ladner, Armando Arias, Danny Asogun, Filip Bielejec, Sarah L. Caddy, Matthew Cotten, Jonathan D'Ambrozio, Simon Dellicour, Antonino Di Caro, Joseph W. Diclaro, Sophie Duraffour, Michael J. Elmore, Lawrence S. Fakoli, Ousmane Faye, Merle L. Gilbert, Sahr M. Gevao, Stephen Gire, Adrianne Gladden-Young, Andreas Gnirke, Augustine Goba, Donald S. Grant, Bart L. Haagmans, Julian A. Hiscox, Umaru Jah, Jeffrey R. Kugelman, Di Liu, Jia Lu, Christine M. Malboeuf, Suzanne Mate, David A. Matthews, Christian B. Matranga, Luke W. Meredith, James Qu, Joshua Quick, Suzan D. Pas, My V. T. Phan, Georgios Pollakis, Chantal B. Reusken, Mariano Sanchez-Lockhart, Stephen F. Schaffner, John S. Schieffelin, Rachel S. G. Sealfon, Etienne Simon-Loriere, Saskia L. Smits, Kilian Stoecker, Lucy Thorne, Ekaete Alice Tobin, Mohamed A. Vandi, Simon J. Watson, Kendra West, Shannon Whitmer, Michael R. Wiley, Sarah M. Winnicki, Shirlee Wohl, Roman Wölfel, Nathan L. Yozwiak, Kristian G. Andersen, Sylvia O. Blyden, Fatorma Bolay, Miles W. Carroll, Bernice Dahn, Boubacar Diallo, Pierre Formenty, Christophe Fraser, George F. Gao, Robert F. Garry, Ian Goodfellow, Stephan Günther, Christian T. Happi, Edward C. Holmes, Brima Kargbo, Sakoba Keïta, Paul Kellam, Marion Koopmans, Jens H. Kuhn, Nicholas J. Loman, N'Faly Magassouba, Dhamari Naidoo, Stuart T. Nichol, Tolbert Nyenswah, Gustavo F. Palacios, Oliver G. Pybus, Pardis C. Sabeti, Amadou Sall, Ute Ströher, Isatta Wurie, Marc A. Suchard, Philippe Lemey, Andrew Rambaut
Virus genomes reveal factors that spread and sustained the Ebola epidemic. Nat. 544 (7650) (2017)
Thibaut Jombart, Anne Cori, Xavier Didelot, Simon Cauchemez, Christophe Fraser, Neil M. Ferguson
Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data. PLoS Comput. Biol. 10 (1) (2014)
Gkikas Magiorkinis, Vana Sypsa, Emmanouil Magiorkinis, Dimitrios Paraskevis, Antigoni Katsoulidou, Robert Belshaw, Christophe Fraser, Oliver George Pybus, Angelos Hatzakis
Integrating Phylodynamics and Epidemiology to Estimate Transmission Diversity in Viral Epidemics. PLoS Comput. Biol. 9 (1) (2013)
Katy Robinson, Nick Fyson, Ted Cohen, Christophe Fraser, Caroline Colijn
How the Dynamics and Structure of Sexual Contact Networks Shape Pathogen Phylogenies. PLoS Comput. Biol. 9 (6) (2013)
Oliver Ratmann, Gé Donker, Adam Meijer, Christophe Fraser, Katia Koelle
Phylodynamic Inference and Model Assessment with Approximate Bayesian Computation: Influenza as a Case Study. PLoS Comput. Biol. 8 (12) (2012)
George Shirreff, Lorenzo Pellis, Oliver Laeyendecker, Christophe Fraser
Transmission Selects for HIV-1 Strains of Intermediate Virulence: A Modelling Approach. PLoS Comput. Biol. 7 (10) (2011)
Jing Tang, William P. Hanage, Christophe Fraser, Jukka Corander
Identifying Currents in the Gene Pool for Bacterial Populations Using an Integrative Approach. PLoS Comput. Biol. 5 (8) (2009)