Paolo Ribeca

Publication Activity (10 Years)

Years Active: 2008-2024
Publications (10 Years): 9

Top Topics

Levenshtein Distance

Parallel Computation

Advances In Data Mining

Top Venues

WOSC@Middleware

Publications

Ünsal Öztürk, Utku Görkem Ertürk, Simone Casale-Brunet, Paolo Ribeca, Marco Mattavelli
Efficient Neural Clustering and Compression of Strings Through Approximate Euclidean Embeddings of the Levenshtein Distance. DCC (2024)
Unsal Ozturk, Paolo Ribeca, Marco Mattavelli
FM-Directories: Extending the Burrows-Wheeler Transform for String Labeled Vertex Graphs of (Almost) Arbitrary Topology. DCC (2023)
Aitor Arjona, Arnau Gabriel-Atienza, Sara Lanuza-Orna, Xavier Roca-Canals, Ayman Bourramouss, Tyler K. Chafin, Lucio Marcello, Paolo Ribeca, Pedro García López
Scaling a Variant Calling Genomics Pipeline with FaaS. CoRR (2023)
Xavier Didelot, David Helekal, Michelle Kendall, Paolo Ribeca
Distinguishing imported cases from locally acquired cases within a geographically limited genomic sample of an infectious disease. Bioinform. 39 (1) (2023)
Aitor Arjona, Arnau Gabriel-Atienza, Sara Lanuza-Orna, Xavier Roca-Canals, Ayman Bourramouss, Tyler K. Chafin, Lucio Marcello, Paolo Ribeca, Pedro García López
Scaling a Variant Calling Genomics Pipeline with FaaS. WOSC@Middleware (2023)
Simone Casale-Brunet, Paolo Ribeca, Claudio Alberti, U. Ozturk, Marco Mattavelli
A Benchmark of Entropy Coders for the Compression of Genome Sequencing Data. DCC (2022)
U. Ozturk, Simone Casale-Brunet, Paolo Ribeca, Marco Mattavelli
MPEG-G Reference-Based Compression of Unaligned Reads Through Ultra-Fast Alignments. DCC (2022)
Simone Casale-Brunet, Paolo Ribeca, P. Doyle, Marco Mattavelli
Networks of Ethereum Non-Fungible Tokens: A graph-based analysis of the ERC-721 ecosystem. CoRR (2021)
Simone Casale-Brunet, Paolo Ribeca, P. Doyle, Marco Mattavelli
Networks of Ethereum Non-Fungible Tokens: A graph-based analysis of the ERC-721 ecosystem. Blockchain (2021)
Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure
Boosting the FM-Index on the GPU: Effective Techniques to Mitigate Random Memory Access. IEEE ACM Trans. Comput. Biol. Bioinform. 12 (5) (2015)
Lukasz Roguski, Paolo Ribeca
CARGO: Effective format-free compressed storage of genomic information. CoRR (2015)
Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure
FM-Index on GPU: A Cooperative Scheme to Reduce Memory Footprint. ISPA (2014)
Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure
Thread-cooperative, bit-parallel computation of levenshtein distance on GPU. ICS (2014)
Paolo Ribeca, Gabriel Valiente
Computational challenges of sequence classification in microbiomic data. Briefings Bioinform. 12 (6) (2011)
Emanuele Raineri, Paolo Ribeca, Luis Serrano, Tobias Maier
A more precise characterization of chaperonin substrates. Bioinform. 26 (14) (2010)
Paolo Ribeca, Emanuele Raineri
Faster exact Markovian probability functions for motif occurrences: a DFA-only approach. Bioinform. 24 (24) (2008)