Wenbin Ye

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 10

Top Topics

Molecular Biology

Data Mining Tasks

Reference Genome

Top Venues

Briefings Bioinform.

Genom. Proteom. Bioinform.

Nucleic Acids Res.

Publications

Wenbin Ye, Qiwei Lian, Congting Ye, Xiaohui Wu
A Survey on Methods for Predicting Polyadenylation Sites from DNA Sequences, Bulk RNA-seq, and Single-cell RNA-seq. Genom. Proteom. Bioinform. 21 (1) (2023)
Sheng Zhu, Qiwei Lian, Wenbin Ye, Wei Qin, Zhe Wu, Guoli Ji, Xiaohui Wu
scAPAdb: a comprehensive database of alternative polyadenylation at single-cell resolution. Nucleic Acids Res. 50 (D1) (2022)
Xiaohui Wu, Tao Liu, Congting Ye, Wenbin Ye, Guoli Ji
scAPAtrap: identification and quantification of alternative polyadenylation sites from single-cell RNA-seq data. Briefings Bioinform. 22 (4) (2021)
Wenbin Ye, Tao Liu, Hongjuan Fu, Congting Ye, Guoli Ji, Xiaohui Wu
movAPA: modeling and visualization of dynamics of alternative polyadenylation across biological samples. Bioinform. 37 (16) (2021)
Congting Ye, Danhui Zhao, Wenbin Ye, Xiaohui Wu, Guoli Ji, Qingshun Quinn Li, Juncheng Lin
QuantifyPoly(A): reshaping alternative polyadenylation landscapes of eukaryotes with weighted density peak clustering. Briefings Bioinform. 22 (6) (2021)
Moliang Chen, Guoli Ji, Hongjuan Fu, Qianmin Lin, Congting Ye, Wenbin Ye, Yaru Su, Xiaohui Wu
A survey on identification and quantification of alternative polyadenylation sites from RNA-seq data. Briefings Bioinform. 21 (4) (2020)
Pengchao Ye, Wenbin Ye, Congting Ye, Shuchao Li, Lishan Ye, Guoli Ji, Xiaohui Wu
scHinter: imputing dropout events for single-cell RNA-seq data with limited sample size. Bioinform. 36 (3) (2020)
Guoli Ji, Wenbin Ye, Yaru Su, Moliang Chen, Guangzao Huang, Xiaohui Wu
AStrap: identification of alternative splicing from transcript sequences without a reference genome. Bioinform. 35 (15) (2019)
Guoli Ji, Moliang Chen, Wenbin Ye, Sheng Zhu, Congting Ye, Yaru Su, Haonan Peng, Xiaohui Wu
TSAPA: identification of tissue-specific alternative polyadenylation sites in plants. Bioinform. 34 (12) (2018)
Guoli Ji, Qianmin Lin, Yuqi Long, Congting Ye, Wenbin Ye, Xiaohui Wu
PAcluster: Clustering polyadenylation site data using canonical correlation analysis. J. Bioinform. Comput. Biol. 15 (5) (2017)