Volker Brendel

Publication Activity (10 Years)

Years Active: 1994-2011
Publications (10 Years): 0

Publications

Carol Lushbough, Douglas M. Jennewein, Volker Brendel
The BioExtract Server: a web-based bioinformatic workflow platform. Nucleic Acids Res. 39 (Web-Server-Issue) (2011)
Carol Lushbough, Michael K. Bergman, Carolyn J. Lawrence, Douglas M. Jennewein, Volker Brendel
BioExtract Server - An Integrated Workflow-Enabling System to Access and Analyze Heterogeneous, Distributed Biomolecular Data. IEEE ACM Trans. Comput. Biol. Bioinform. 7 (1) (2010)
Matthew D. Wilkerson, Yuanbin Ru, Volker Brendel
Common introns within orthologous genes: software and application to plants. Briefings Bioinform. 10 (6) (2009)
Carol Lushbough, Michael K. Bergman, Carolyn J. Lawrence, Douglas M. Jennewein, Volker Brendel
Implementing bioinformatic workflows within the BioExtract Server. Int. J. Comput. Biol. Drug Des. 1 (3) (2008)
Carol Lushbough, Jon Duvick, Qunfeng Dong, Douglas M. Jennewein, Joe Reynoldson, Volker Brendel
TableMaker: An ad hoc Query Tool for Relational Databases. BIOCOMP (2008)
Michael E. Sparks, Volker Brendel
MetWAMer: eukaryotic translation initiation site prediction. BMC Bioinform. 9 (2008)
Ankit Agrawal, Volker Brendel, Xiaoqiu Huang
Pairwise statistical significance and empirical determination of effective gap opening penalties for protein local sequence alignment. Int. J. Comput. Biol. Drug Des. 1 (4) (2008)
Ankit Agrawal, Volker Brendel, Xiaoqiu Huang
Pairwise Statistical Significance Versus Database Statistical Significance for Local Alignment of Protein Sequences. ISBRA (2008)
Jon Duvick, Ann Fu, Usha Muppirala, Mukul Sabharwal, Matthew D. Wilkerson, Carolyn J. Lawrence, Carol Lushbough, Volker Brendel
PlantGDB: a resource for comparative plant genomics. Nucleic Acids Res. 36 (Database-Issue) (2008)
Carol Lushbough, Volker Brendel
An Overview of the BioExtract Server - a Distributed, Web Based Application for Bioinformatic Analysis. BIOCOMP (2008)
Michael E. Sparks, Volker Brendel, Karin S. Dorman
Markov Model Variants for Appraisal of Coding Potential in Plant DNA. ISBRA (2007)
Carol Lushbough, Michael K. Bergman, Carolyn J. Lawrence, Douglas M. Jennewein, Volker Brendel
Creating Bioinformatic Workflows within the BioExtract Server. BIOCOMP (2007)
Qunfeng Dong, Matthew D. Wilkerson, Volker Brendel
chromosome walking in unassembled genomes. BMC Bioinform. 8 (2007)
Michael E. Sparks, Volker Brendel
Incorporation of splice site probability models for non-canonical introns improves gene structure prediction in plants. Bioinform. 21 (S3) (2005)
Gordon Gremme, Volker Brendel, Michael E. Sparks, Stefan Kurtz
Engineering a software tool for gene structure prediction in higher organisms. Inf. Softw. Technol. 47 (15) (2005)
Xiaokang Pan, Lincoln Stein, Volker Brendel
SynBrowse: a synteny browser for comparative sequence analysis. Bioinform. 21 (17) (2005)
Qunfeng Dong, Shannon D. Schlueter, Volker Brendel
PlantGDB, plant genome database and analysis tools. Nucleic Acids Res. 32 (Database-Issue) (2004)
Carolyn J. Lawrence, Qunfeng Dong, Mary L. Polacco, Trent E. Seigfried, Volker Brendel
MaizeGDB, the community database for maize genetics and genomics. Nucleic Acids Res. 32 (Database-Issue) (2004)
Volker Brendel, Liqun Xing, Wei Zhu
Gene structure prediction from consensus spliced alignment of multiple ESTs matching the same genomic locus. Bioinform. 20 (7) (2004)
Qunfeng Dong, Laura Roy, Michael Freeling, Virginia Walbot, Volker Brendel
ZmDB, an integrated database for maize genome research. Nucleic Acids Res. 31 (1) (2003)
Anantharaman Kalyanaraman, Srinivas Aluru, Volker Brendel, Suresh C. Kothari
Space and time efficient parallel algorithms and software for EST clustering. IEEE Trans. Parallel Distributed Syst. 14 (12) (2003)
Shannon D. Schlueter, Qunfeng Dong, Volker Brendel
GeneSeqer add PlantGDB: gene structure prediction in plant genomes. Nucleic Acids Res. 31 (13) (2003)
Volker Brendel
Integration of Data Management and Analysis for Genome Research. GI Jahrestagung (Ergänzungsband) (2002)
Wei Zhu, Volker Brendel
Gene structure identification with MyGV using cDNA evidence and protein homologs to improve ab initio predictions. Bioinform. 18 (5) (2002)
Liqun Xing, Volker Brendel
Multi-query sequence BLAST output examination with MuSeqBox. Bioinform. 17 (8) (2001)
Jonathan Usuka, Wei Zhu, Volker Brendel
Optimal spliced alignment of homologous cDNA to a genomic DNA template. Bioinform. 16 (3) (2000)
Xiaowu Gai, Shailesh Lal, Liqun Xing, Volker Brendel, Virginia Walbot
Gene discovery using the maize genome database ZmDB. Nucleic Acids Res. 28 (1) (2000)
Jürgen Kleffe, Klaus Hermann, Wolfgang Vahrson, Burghardt Wittig, Volker Brendel
GeneGenerator - a flexible algorithm for gene prediction and its application to maize sequences. Bioinform. 14 (3) (1998)
Jürgen Kleffe, Klaus Hermann, Wolfgang Vahrson, Burghardt Wittig, Volker Brendel
GeneGenerator- a flexible algorfthm for gene prediction. German Conference on Bioinformatics (1997)
Volker Brendel, Samuel Karlin
Applications of Statistical Criteria in Protein Sequence Analysis: Case Study of Yeast RNA Polymerase II Subunits. Comput. Chem. 18 (3) (1994)