Timothy G. Vaughan

Publication Activity (10 Years)

Years Active: 2010-2024
Publications (10 Years): 4

Top Topics

Software Platform

Top Venues

PLoS Comput. Biol.

Publications

Timothy G. Vaughan
improved phylodynamic simulation for BEAST 2.7. Bioinform. 40 (1) (2024)
Pierre Barrat-Charlaix, Timothy G. Vaughan, Richard A. Neher
TreeKnit: Inferring ancestral reassortment graphs of influenza viruses. PLoS Comput. Biol. 18 (8) (2022)
Remco R. Bouckaert, Timothy G. Vaughan, Joëlle Barido-Sottani, Sebastián Duchêne, Mathieu Fourment, Alexandra Gavryushkina, Joseph Heled, Graham Jones, Denise Kühnert, Nicola De Maio, Michael Matschiner, Fábio K. Mendes, Nicola F. Müller, Huw A. Ogilvie, Louis du Plessis, Alex Popinga, Andrew Rambaut, David A. Rasmussen, Igor Siveroni, Marc A. Suchard, Chieh-Hsi Wu, Dong Xie, Chi Zhang, Tanja Stadler, Alexei J. Drummond
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis. PLoS Comput. Biol. 15 (4) (2019)
Timothy G. Vaughan
IcyTree: rapid browser-based visualization for phylogenetic trees and networks. Bioinform. 33 (15) (2017)
Timothy G. Vaughan, Denise Kühnert, Alex Popinga, David Welch, Alexei J. Drummond
Efficient Bayesian inference under the structured coalescent. Bioinform. 30 (16) (2014)
Remco R. Bouckaert, Joseph Heled, Denise Kühnert, Timothy G. Vaughan, Chieh-Hsi Wu, Dong Xie, Marc A. Suchard, Andrew Rambaut, Alexei J. Drummond
BEAST 2: A Software Platform for Bayesian Evolutionary Analysis. PLoS Comput. Biol. 10 (4) (2014)
Timothy G. Vaughan, Peter D. Drummond, Alexei J. Drummond
A retrodictive stochastic simulation algorithm. J. Comput. Phys. 229 (10) (2010)