Huw A. Ogilvie

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 7

Top Topics

Recursive Neural Networks

Bayesian Inference

Manual Annotation

Inter Annotator Agreement

Top Venues

PLoS Comput. Biol.

Publications

Yushu Liu, Mohammad Amin Edrisi, Zhi Yan, Huw A. Ogilvie, Luay Nakhleh
NestedBD: Bayesian inference of phylogenetic trees from single-cell copy number profiles under a birth-death model. Algorithms Mol. Biol. 19 (1) (2024)
Mohammad Amin Edrisi, Huw A. Ogilvie, Meng Li, Luay Nakhleh
MoTERNN: Classifying the Mode of Cancer Evolution Using Recursive Neural Networks. RECOMB-CG (2023)
Yongze Yin, Huw A. Ogilvie, Luay Nakhleh
Annotation-free delineation of prokaryotic homology groups. PLoS Comput. Biol. 18 (6) (2022)
Berk A. Yakici, Huw A. Ogilvie, Luay Nakhleh
Phylogenetic Network Dissimilarity Measures that Take Branch Lengths into Account. RECOMB-CG (2022)
Jiafan Zhu, Xinhao Liu, Huw A. Ogilvie, Luay Nakhleh
A divide-and-conquer method for scalable phylogenetic network inference from multilocus data. Bioinform. 35 (14) (2019)
Peng Du, Huw A. Ogilvie, Luay Nakhleh
Unifying Gene Duplication, Loss, and Coalescence on Phylogenetic Networks. ISBRA (2019)
Remco R. Bouckaert, Timothy G. Vaughan, Joëlle Barido-Sottani, Sebastián Duchêne, Mathieu Fourment, Alexandra Gavryushkina, Joseph Heled, Graham Jones, Denise Kühnert, Nicola De Maio, Michael Matschiner, Fábio K. Mendes, Nicola F. Müller, Huw A. Ogilvie, Louis du Plessis, Alex Popinga, Andrew Rambaut, David A. Rasmussen, Igor Siveroni, Marc A. Suchard, Chieh-Hsi Wu, Dong Xie, Chi Zhang, Tanja Stadler, Alexei J. Drummond
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis. PLoS Comput. Biol. 15 (4) (2019)