Susumu Okazaki

Publication Activity (10 Years)

Years Active: 2017-2022
Publications (10 Years): 12

Top Topics

Molecular Dynamics

Top Venues

J. Comput. Chem.

J. Chem. Inf. Model.

J. Supercomput.

Publications

Hiromi Baba, Ryo Urano, Tetsuro Nagai, Susumu Okazaki
Cover Image. J. Comput. Chem. 43 (28) (2022)
Hiromi Baba, Ryo Urano, Tetsuro Nagai, Susumu Okazaki
Prediction of self-diffusion coefficients of chemically diverse pure liquids by all-atom molecular dynamics simulations. J. Comput. Chem. 43 (28) (2022)
Yoshimichi Andoh, Shin'ichi Ichikawa, Tatsuya Sakashita, Noriyuki Yoshii, Susumu Okazaki
Algorithm to minimize MPI communications in the parallelized fast multipole method combined with molecular dynamics calculations. J. Comput. Chem. 42 (15) (2021)
Yoshimichi Andoh, Noriyuki Yoshii, Susumu Okazaki
Extension of the fast multipole method for the rectangular cells with an anisotropic partition tree structure. J. Comput. Chem. 41 (14) (2020)
Noriyuki Yoshii, Yoshimichi Andoh, Susumu Okazaki
Fast multipole method for three-dimensional systems with periodic boundary condition in two directions. J. Comput. Chem. 41 (9) (2020)
Kosuke Takeda, Kazushi Fujimoto, Noriyuki Yoshii, Susumu Okazaki
Molecular dynamics study of solubilization of cyclohexane, benzene, and phenol into mixed micelles composed of sodium dodecyl sulfate and octaethylene glycol monododecyl ether. J. Comput. Chem. 40 (31) (2019)
Huihui Liu, Susumu Okazaki, Wataru Shinoda
Heteroaryldihydropyrimidines Alter Capsid Assembly By Adjusting the Binding Affinity and Pattern of the Hepatitis B Virus Core Protein. J. Chem. Inf. Model. 59 (12) (2019)
Kazushi Fujimoto, Rajadeep Singh Payal, Tomonori Hattori, Wataru Shinoda, Masayuki Nakagaki, Shigeyoshi Sakaki, Susumu Okazaki
Development of dissociative force field for all-atomistic molecular dynamics calculation of fracture of polymers. J. Comput. Chem. 40 (29) (2019)
Yoshimichi Andoh, Soichiro Suzuki, Satoshi Ohshima, Tatsuya Sakashita, Masao Ogino, Takahiro Katagiri, Noriyuki Yoshii, Susumu Okazaki
A thread-level parallelization of pairwise additive potential and force calculations suitable for current many-core architectures. J. Supercomput. 74 (6) (2018)
Noriyuki Yoshii, Yoshimichi Andoh, Susumu Okazaki
Pressure tensor for electrostatic interaction calculated by fast multipole method with periodic boundary condition. J. Comput. Chem. 39 (19) (2018)
Soumya Lipsa Rath, Huihui Liu, Susumu Okazaki, Wataru Shinoda
Identification of Factors Promoting HBV Capsid Self-Assembly by Assembly-Promoting Antivirals. J. Chem. Inf. Model. 58 (2) (2018)
Yoshimichi Andoh, Noriyuki Yoshii, Atsushi Yamada, Susumu Okazaki
Evaluation of atomic pressure in the multiple time-step integration algorithm. J. Comput. Chem. 38 (10) (2017)