Stefano Castellana

Publication Activity (10 Years)

Years Active: 2013-2022
Publications (10 Years): 5

Top Topics

Transcription Factors

Motif Discovery

Authoring Environment

Top Venues

Briefings Bioinform.

Nucleic Acids Res.

Frontiers Bioinform.

Publications

Francesco Petrizzelli, Tommaso Biagini, Salvatore Daniele Bianco, Niccolò Liorni, Alessandro Napoli, Stefano Castellana, Tommaso Mazza
Connecting the dots: A practical evaluation of web-tools for describing protein dynamics as networks. Frontiers Bioinform. 2 (2022)
Stefano Castellana, Tommaso Biagini, Luca Parca, Francesco Petrizzelli, Salvatore Daniele Bianco, Angelo Luigi Vescovi, Massimo Carella, Tommaso Mazza
A comparative benchmark of classic DNA motif discovery tools on synthetic data. Briefings Bioinform. 22 (6) (2021)
Stefano Castellana, Tommaso Biagini, Francesco Petrizzelli, Luca Parca, Noemi Panzironi, Viviana Caputo, Angelo L. Vescovi, Massimo Carella, Tommaso Mazza
MitImpact 3: modeling the residue interaction network of the Respiratory Chain subunits. Nucleic Acids Res. 49 (Database-Issue) (2021)
Tommaso Biagini, Giovanni Chillemi, Gianluigi Mazzoccoli, Alessandro Grottesi, Caterina Fusilli, Daniele Capocefalo, Stefano Castellana, Angelo L. Vescovi, Tommaso Mazza
Molecular dynamics recipes for genome research. Briefings Bioinform. 19 (5) (2018)
Stefano Castellana, Caterina Fusilli, Gianluigi Mazzoccoli, Tommaso Biagini, Daniele Capocefalo, Massimo Carella, Angelo L. Vescovi, Tommaso Mazza
High-confidence assessment of functional impact of human mitochondrial non-synonymous genome variations by APOGEE. PLoS Comput. Biol. 13 (6) (2017)
Tommaso Mazza, Stefano Castellana
Multi-Sided Compression Performance Assessment of ABI SOLiD WES Data. Algorithms 6 (2) (2013)
Tommaso Mazza, Stefano Castellana, Angelo Andriulli, Charles Auffray, Manlio Vinciguerra, Valerio Pazienza
Affinity analysis of differentially expressed genes in hepatocytes expressing HCV core genotype 1b or 3a. Biosyst. 114 (1) (2013)
Stefano Castellana, Marta Romani, Enza Maria Valente, Tommaso Mazza
A solid quality-control analysis of AB SOLiD short-read sequencing data. Briefings Bioinform. 14 (6) (2013)
Stefano Castellana, Tommaso Mazza
Congruency in the prediction of pathogenic missense mutations: state-of-the-art web-based tools. Briefings Bioinform. 14 (4) (2013)