Sonika Tyagi

Publication Activity (10 Years)

Years Active: 2013-2024
Publications (10 Years): 10

Top Topics

Top Venues

Briefings Bioinform.

Comput. Biol. Medicine

J. Biomed. Informatics

Publications

Naima Vahab, Tarun Bonu, Levin Kuhlmann, Mirana Ramialison, Sonika Tyagi
Uncovering co-regulatory modules and gene regulatory networks in the heart through machine learning-based analysis of large-scale epigenomic data. Comput. Biol. Medicine 171 (2024)
Yashpal Ramakrishnaiah, Nenad Macesic, Geoffrey I. Webb, Anton Y. Peleg, Sonika Tyagi
EHR-QC: A streamlined pipeline for automated electronic health records standardisation and preprocessing to predict clinical outcomes. J. Biomed. Informatics 147 (2023)
Tyrone Chen, Al J. Abadi, Kim-Anh Lê Cao, Sonika Tyagi
multiomics: A user-friendly multi-omics data harmonisation R pipeline. F1000Research 10 (2021)
Tyrone Chen, Melcy Philip, Kim-Anh Lê Cao, Sonika Tyagi
A multi-modal data harmonisation approach for discovery of COVID-19 drug targets. Briefings Bioinform. 22 (6) (2021)
Yashpal Ramakrishnaiah, Levin Kuhlmann, Sonika Tyagi
Towards a comprehensive pipeline to identify and functionally annotate long noncoding RNA (lncRNA). Comput. Biol. Medicine 127 (2020)
John D. Van Horn, Sumiko Abe, José Luis Ambite, Teresa K. Attwood, Niall Beard, Louisa Bellis, Avnish Bhattrai, Alex A. T. Bui, Gully Burns, Lily Fierro, Jonathan Gordon, Jeffrey S. Grethe, Jeana Kamdar, Xiaoyu Lei, Kristina Lerman, Annette McGrath, Nicola J. Mulder, Caroline O'Driscoll, Crystal Stewart, Sonika Tyagi
Advancing the international data science workforce through shared training and education. F1000Research 8 (2019)
Maria Victoria Schneider, Philippa C. Griffin, Sonika Tyagi, Madison Flannery, Saravanan Dayalan, Simon Gladman, Nathan S. Watson-Haigh, Philipp E. Bayer, Michael Charleston, Ira Cooke, Rob Cook, Richard J. Edwards, David Edwards, Dominique Gorse, Malcolm J. McConville, David Powell, Marc R. Wilkins, Andrew Lonie
Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia. Briefings Bioinform. 20 (2) (2019)
Nathan S. Watson-Haigh, Jerico Nico De Leon Revote, Radoslaw Suchecki, Sonika Tyagi, Susan M. Corley, Catherine A. Shang, Annette McGrath
Towards an open, collaborative, reusable framework for sharing hands-on bioinformatics training workshops. Briefings Bioinform. 18 (2) (2017)
Philippa C. Griffin, Jyoti Khadake, Kate S. LeMay, Suzanna E. Lewis, Sandra E. Orchard, Andrew Pask, Bernard J. Pope, Ute Roessner, Keith Russell, Torsten Seemann, Andrew E. Treloar, Sonika Tyagi, Jeffrey H. Christiansen, Saravanan Dayalan, Simon Gladman, Sandra B. Hangartner, Helen L. Hayden, William W. H. Ho, Gabriel Keeble-Gagnère, Pasi K. Korhonen, Peter Neish, Priscilla R. Prestes, Mark F. Richardson, Nathan S. Watson-Haigh, Kelly L. Wyres, Neil D. Young, Maria Victoria Schneider
Best practice data life cycle approaches for the life sciences. F1000Research 6 (2017)
Rafael C. Jiménez, Mateusz Kuzak, Monther Alhamdoosh, Michelle Barker, Bérénice Batut, Mikael Borg, Salvador Capella-Gutiérrez, Neil P. Chue Hong, Martin Cook, Manuel Corpas, Madison Flannery, Leyla J. García, Josep Lluis Gelpí, Simon Gladman, Carole A. Goble, Montserrat González Ferreiro, Alejandra N. González-Beltrán, Philippa C. Griffin, Björn A. Grüning, Jonas Hagberg, Petr Holub, Rob W. W. Hooft, Jon C. Ison, Daniel S. Katz, Brane Leskosek, Federico López-Gómez, Luis J. Oliveira, David Mellor, Rowland Mosbergen, Nicola J. Mulder, Yasset Pérez-Riverol, Robert Pergl, Horst Pichler, Bernard J. Pope, Ferran Sanz, Maria Victoria Schneider, Victoria Stodden, Radoslaw Suchecki, Radka Svobodová Vareková, Harry-Anton Talvik, Ilian T. Todorov, Andrew E. Treloar, Sonika Tyagi, Maarten van Gompel, Daniel Vaughan, Allegra Via, Xiaochuan Wang, Nathan S. Watson-Haigh, Steve Crouch
Four simple recommendations to encourage best practices in research software. F1000Research 6 (2017)
Nathan S. Watson-Haigh, Catherine A. Shang, Matthias Haimel, Myrto Kostadima, Remco Loos, Nandan Deshpande, Konsta Duesing, Xi Li, Annette McGrath, Sean McWilliam, Simon Michnowicz, Paula Moolhuijzen, Steve Quenette, Jerico Nico De Leon Revote, Sonika Tyagi, Maria Victoria Schneider
Next-generation sequencing: a challenge to meet the increasing demand for training workshops in Australia. Briefings Bioinform. 14 (5) (2013)