Shirley W. I. Siu

Publication Activity (10 Years)

Years Active: 2004-2022
Publications (10 Years): 14

Top Topics

Firefly Algorithm

Normal Direction

Top Venues

J. Cheminformatics

Publications

Jielu Yan, Bob Zhang, Mingliang Zhou, Hang Fai Kwok, Shirley W. I. Siu
Multi-Branch-CNN: Classification of ion channel interacting peptides using multi-branch convolutional neural network. Comput. Biol. Medicine 147 (2022)
Jiarui Chen, Hong-Hin Cheong, Shirley W. I. Siu
xDeep-AcPEP: Deep Learning Method for Anticancer Peptide Activity Prediction Based on Convolutional Neural Network and Multitask Learning. J. Chem. Inf. Model. 61 (8) (2021)
Faraz Shaikh, Hio Kuan Tai, Nirali Desai, Shirley W. I. Siu
LigTMap: ligand and structure-based target identification and activity prediction for small molecular compounds. J. Cheminformatics 13 (1) (2021)
Jiarui Chen, Yain-Whar Si, Chon-Wai Un, Shirley W. I. Siu
Chemical toxicity prediction based on semi-supervised learning and graph convolutional neural network. J. Cheminformatics 13 (1) (2021)
Tengyue Li, Simon Fong, Shirley W. I. Siu, Xin-She Yang, Liansheng Liu, Sabah Mohammed
White learning methodology: A case study of cancer-related disease factors analysis in real-time PACS environment. Comput. Methods Programs Biomed. 197 (2020)
Lu Gao, Shirley W. I. Siu
Study of Data Imbalanced Problem in Protein-peptide Binding Prediction. ICBBT (2020)
Meng Chi Ao, Shirley W. I. Siu
Evaluating Variants of Firefly Algorithm for Ligand Pose Prediction in Protein-ligand Docking Program. ICBBT (2020)
Hio Kuan Tai, Siti Azma Jusoh, Shirley W. I. Siu
Chaos-embedded particle swarm optimization approach for protein-ligand docking and virtual screening. J. Cheminformatics 10 (1) (2018)
Kairong Duan, Simon Fong, Shirley W. I. Siu, Wei Song, Steven Sheng-Uei Guan
Adaptive Incremental Genetic Algorithm for Task Scheduling in Cloud Environments. Symmetry 10 (5) (2018)
Han Cao, Marcus C. K. Ng, Siti Azma Jusoh, Hio Kuan Tai, Shirley W. I. Siu
TMDIM: an improved algorithm for the structure prediction of transmembrane domains of bitopic dimers. J. Comput. Aided Mol. Des. 31 (9) (2017)
Jimmy C. F. Ngai, Pui-In Mak, Shirley W. I. Siu
ProtPOS: a python package for the prediction of protein preferred orientation on a surface. Bioinform. 32 (16) (2016)
Hio Kuan Tai, Hang Lin, Shirley W. I. Siu
Improving the efficiency of PSOVina for protein-ligand docking by two-stage local search. CEC (2016)
Jimmy C. F. Ngai, Pui-In Mak, Shirley W. I. Siu
Predicting favorable protein docking poses on a solid surface by particle swarm optimization. CEC (2015)
Marcus C. K. Ng, Simon Fong, Shirley W. I. Siu
PSOVina: The hybrid particle swarm optimization algorithm for protein-ligand docking. J. Bioinform. Comput. Biol. 13 (3) (2015)
Shirley W. I. Siu, Thomas K. F. Wong, Simon Fong
Comparison of Cutoff Strategies for Geometrical Features in Machine Learning-Based Scoring Functions. ADMA (2) (2013)
Iris Antes, Shirley W. I. Siu, Thomas Lengauer
DynaPred: A structure and sequence based method for the prediction of MHC class I binding peptide sequences and conformations. ISMB (Supplement of Bioinformatics) (2006)
António Leong, Simon Fong, Shirley W. I. Siu
Smart Card-Based Irregular Access Patterns Detection System. EEE (2004)