ProtPOS: a python package for the prediction of protein preferred orientation on a surface.
Jimmy C. F. NgaiPui-In MakShirley W. I. SiuPublished in: Bioinform. (2016)
Keyphrases
- subcellular localization
- protein structure prediction
- protein secondary structure
- contact map
- prediction accuracy
- drug design
- protein sequences
- protein tertiary structure
- programming language
- protein homology
- protein structure
- predicting protein
- normal vectors
- experimentally determined
- surface patches
- three dimensional
- protein secondary structure prediction
- protein interaction
- surface orientation
- prediction error
- open source
- protein function prediction
- contact maps
- precise localization
- remote homology detection
- d objects
- geometrical properties
- genomic sequences
- secondary structure
- amino acids
- surface reconstruction
- dead end
- normal direction
- image brightness
- amino acid sequences
- aspect ratio