Quim Aguado-Puig

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 6

Top Topics

String Matching

Benchmark Suite

Sequence Alignment

Top Venues

Future Gener. Comput. Syst.

Publications

Lorién López-Villellas, Rubén Langarita-Benítez, Asaf Badouh, Víctor Soria Pardos, Quim Aguado-Puig, Guillem López-Paradís, Max Doblas, Javier Setoain, Chulho Kim, Makoto Ono, Adrià Armejach, Santiago Marco-Sola, Jesús Alastruey-Benedé, Pablo Ibáñez, Miquel Moretó
GenArchBench: A genomics benchmark suite for arm HPC processors. Future Gener. Comput. Syst. 157 (2024)
Max Doblas, Oscar Lostes-Cazorla, Quim Aguado-Puig, Nick Cebry, Pau Fontova-Musté, Christopher Frances Batten, Santiago Marco-Sola, Miquel Moretó
GMX: Instruction Set Extensions for Fast, Scalable, and Efficient Genome Sequence Alignment. MICRO (2023)
Quim Aguado-Puig, Max Doblas, Christos Matzoros, Antonio Espinosa, Juan Carlos Moure, Santiago Marco-Sola, Miquel Moretó
WFA-GPU: gap-affine pairwise read-alignment using GPUs. Bioinform. 39 (12) (2023)
Quim Aguado-Puig, Santiago Marco-Sola, Juan Carlos Moure, David Castells-Rufas, Lluc Alvarez, Antonio Espinosa, Miquel Moretó
Accelerating Edit-Distance Sequence Alignment on GPU Using the Wavefront Algorithm. IEEE Access 10 (2022)
David Castells-Rufas, Santiago Marco-Sola, Juan Carlos Moure, Quim Aguado-Puig, Antonio Espinosa
FPGA Acceleration of Pre-Alignment Filters for Short Read Mapping With HLS. IEEE Access 10 (2022)
David Castells-Rufas, Santiago Marco-Sola, Quim Aguado-Puig, Antonio Espinosa-Morales, Juan Carlos Moure, Lluc Alvarez, Miquel Moretó
OpenCL-based FPGA Accelerator for Semi-Global Approximate String Matching Using Diagonal Bit-Vectors. FPL (2021)