FPGA Acceleration of Pre-Alignment Filters for Short Read Mapping With HLS.
David Castells-RufasSantiago Marco-SolaJuan Carlos MoureQuim Aguado-PuigAntonio EspinosaPublished in: IEEE Access (2022)
Keyphrases
- reference genome
- real time
- high speed
- high throughput sequencing
- signal processing
- hardware implementation
- edge detection
- median filter
- rna seq
- real time image processing
- sequence alignment
- edge enhancement
- software implementation
- ontology mapping
- field programmable gate array
- image alignment
- data acquisition
- low cost