Peter Murray-Rust

Publication Activity (10 Years)

Years Active: 1997-2022
Publications (10 Years): 2

Top Topics

Scientific Literature

Semantically Meaningful

Top Venues

J. Cheminformatics

Concurr. Comput. Pract. Exp.

Publications

Ayush Garg, Richard Smith-Unna, Peter Murray-Rust
'pygetpapers': a Python library for automated retrieval of scientific literature. J. Open Source Softw. 7 (75) (2022)
Chris Hartgerink, Peter Murray-Rust
Extracting data from vector figures in scholarly articles. CoRR (2017)
Matthew J. Harvey, Nicholas J. Mason, Andrew McLean, Peter Murray-Rust, Henry S. Rzepa, James J. P. Stewart
Standards-based curation of a decade-old digital repository dataset of molecular information. J. Cheminformatics 7 (2015)
Peter Murray-Rust, Richard Smith-Unna, Ross Mounce
AMI-diagram: Mining Facts from Images. D Lib Mag. 20 (11/12) (2014)
Richard Smith-Unna, Peter Murray-Rust
The ContentMine Scraping Stack: Literature-scale Content Mining with Community-maintained Collections of Declarative Scrapers. D Lib Mag. 20 (11/12) (2014)
Michelle Brook, Peter Murray-Rust, Charles Oppenheim
The Social, Political and Legal Aspects of Text and Data Mining (TDM). D Lib Mag. 20 (11/12) (2014)
Dave Murray-Rust, Peter Murray-Rust
The Declaratron, semantic specification for scientific computation using MathML. CoRR (2013)
Peter Murray-Rust
How do we make Scholarship Semantic? SePublica (2013)
Dave Murray-Rust, Peter Murray-Rust
The Declaratron, semantic specification for scientific computation using MathML. CICM Workshops (2013)
Xiaoyu Yang, Martin T. Dove, Richard Paul Bruin, Andrew D. Walkingshaw, Richard Sinclair, Dan J. Wilson, Peter Murray-Rust
An e-Science data infrastructure for simulations within Grid computing environment: methods, approaches and practice. Concurr. Comput. Pract. Exp. 25 (3) (2013)
Cameron Neylon, Jan Aerts, C. Titus Brown, Simon J. Coles, Les Hatton, Daniel Lemire, K. Jarrod Millman, Peter Murray-Rust, Fernando Pérez, Neil F. W. Saunders, Nigam Shah, Arfon M. Smith, Gaël Varoquaux, Egon L. Willighagen
Changing computational research. The challenges ahead. Source Code Biol. Medicine 7 (2012)
Sam E. Adams, Peter Murray-Rust
Chempound - a Web 2.0-inspired repository for physical science data. J. Digit. Inf. 13 (1) (2012)
Weerapong Phadungsukanan, Markus Kraft, Joe Townsend, Peter Murray-Rust
The semantics of Chemical Markup Language (CML) for computational chemistry: CompChem. J. Cheminformatics 4 (2012)
Peter Murray-Rust, Henry S. Rzepa
Semantic physical science. J. Cheminformatics 4 (2012)
David M. Jessop, Sam E. Adams, Peter Murray-Rust
Mining chemical information from open patents. J. Cheminformatics 3 (2011)
Peter Murray-Rust, Henry S. Rzepa
CML: Evolution and design. J. Cheminformatics 3 (2011)
Lezan Hawizy, David M. Jessop, Nico Adams, Peter Murray-Rust
ChemicalTagger: A tool for semantic text-mining in chemistry. J. Cheminformatics 3 (2011)
Daniel M. Lowe, Peter T. Corbett, Peter Murray-Rust, Robert C. Glen
Chemical Name to Structure: OPSIN, an Open Source Solution. J. Chem. Inf. Model. 51 (3) (2011)
Noel M. O'Boyle, Rajarshi Guha, Egon L. Willighagen, Sam E. Adams, Jonathan Alvarsson, Jean-Claude Bradley, Igor V. Filippov, Robert M. Hanson, Marcus D. Hanwell, Geoffrey R. Hutchison, Craig A. James, Nina Jeliazkova, Andrew S. I. D. Lang, Karol M. Langner, David C. Lonie, Daniel M. Lowe, Jérôme Pansanel, Dmitry Pavlov, Ola Spjuth, Christoph Steinbeck, Adam L. Tenderholt, Kevin J. Theisen, Peter Murray-Rust
Open Data, Open Source and Open Standards in chemistry: The Blue Obelisk five years on. J. Cheminformatics 3 (2011)
Sam E. Adams, Pablo de Castro, Pablo Echenique, Jorge Estrada, Marcus D. Hanwell, Peter Murray-Rust, Paul Sherwood, Jens Thomas, Joe Townsend
The Quixote project: Collaborative and Open Quantum Chemistry data management in the Internet age. J. Cheminformatics 3 (2011)
Joe Townsend, Peter Murray-Rust
CMLLite: a design philosophy for CML. J. Cheminformatics 3 (2011)
Peter Murray-Rust, Sam E. Adams, Jim Downing, Joe Townsend, Yong Zhang
The semantic architecture of the World-Wide Molecular Matrix (WWMM). J. Cheminformatics 3 (2011)
Brian Brooks, Adam L. Thorn, Matthew Smith, Peter Matthews, Shaoming Chen, Ben O'Steen, Sam E. Adams, Joe Townsend, Peter Murray-Rust
Ami - The chemist's amanuensis. J. Cheminformatics 3 (2011)
Richard Jones, Mark MacGillivray, Peter Murray-Rust, Jim Pitman, Peter Sefton, Ben O'Steen, William Waites
Open Bibliography for Science, Technology, and Medicine. J. Cheminformatics 3 (2011)
Peter Murray-Rust
Semantic science and its communication - a personal view. J. Cheminformatics 3 (2011)
David M. Jessop, Sam E. Adams, Egon L. Willighagen, Lezan Hawizy, Peter Murray-Rust
OSCAR4: a flexible architecture for chemical text-mining. J. Cheminformatics 3 (2011)
Peter Murray-Rust, Joe Townsend, Sam E. Adams, Weerapong Phadungsukanan, Jens Thomas
The semantics of Chemical Markup Language (CML): dictionaries and conventions. J. Cheminformatics 3 (2011)
Jim Downing, Matt J. Harvey, Peter B. Morgan, Peter Murray-Rust, Henry S. Rzepa, Diana C. Stewart, Alan P. Tonge, Joe Townsend
SPECTRa-T: Machine-Based Data Extraction and Semantic Searching of Chemistry e-Theses. J. Chem. Inf. Model. 50 (2) (2010)
Joseph A. Townsend, Jim Downing, Peter Murray-Rust
CHIC - Converting Hamburgers into Cows. eScience (2009)
Nick Day, Jim Downing, Lezan Hawizy, Nico Adams, Peter Murray-Rust
Towards Lensfield - Data Management, Processing and Semantic Publication for Vernacular e-Science. eScience (2009)
C. J. Rupp, Ann A. Copestake, Peter T. Corbett, Peter Murray-Rust, Advaith Siddharthan, Simone Teufel, Benjamin Waldron
Language Resources and Chemical Informatics. LREC (2008)
Jim Downing, Peter Murray-Rust, Alan P. Tonge, Peter B. Morgan, Henry S. Rzepa, Fiona Cotterill, Nick Day, Matt J. Harvey
SPECTRa: The Deposition and Validation of Primary Chemistry Research Data in Digital Repositories. J. Chem. Inf. Model. 48 (8) (2008)
Nico Adams, Jerry Winter, Peter Murray-Rust, Henry S. Rzepa
Chemical Markup, XML and the World-Wide Web. 8. Polymer Markup Language. J. Chem. Inf. Model. 48 (11) (2008)
Gemma L. Holliday, Daniel E. Almonacid, Gail J. Bartlett, Noel M. O'Boyle, James W. Torrance, Peter Murray-Rust, John B. O. Mitchell, Janet M. Thornton
MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms. Nucleic Acids Res. 35 (Database-Issue) (2007)
Ola Spjuth, Tobias Helmus, Egon L. Willighagen, Stefan Kuhn, Martin Eklund, Johannes Wagener, Peter Murray-Rust, Christoph Steinbeck, Jarl E. S. Wikberg
Bioclipse: an open source workbench for chemo- and bioinformatics. BMC Bioinform. 8 (2007)
Peter Murray-Rust
Mathematics and Scientific Markup. Calculemus/MKM (2007)
Stefan Kuhn, Tobias Helmus, Robert J. Lancashire, Peter Murray-Rust, Henry S. Rzepa, Christoph Steinbeck, Egon L. Willighagen
Chemical Markup, XML, and the World Wide Web, 7. CMLSpect, an XML Vocabulary for Spectral Data. J. Chem. Inf. Model. 47 (6) (2007)
Toby O. H. White, Martin T. Dove, Richard Paul Bruin, Kat F. Austen, Andrew M. Walker, Emilio Artacho, Arnaud Marmier, Steve C. Parker, Peter Murray-Rust, Andrew D. Walkingshaw, Philip A. Couch, Rik P. Tyer, Ilian T. Todorov, Dan J. Wilson
Information Delivery in Computational Mineral Science: The eMinerals Data Handling System. e-Science (2006)
Peter T. Corbett, Peter Murray-Rust
High-Throughput Identification of Chemistry in Life Science Texts. CompLife (2006)
Gemma L. Holliday, Peter Murray-Rust, Henry S. Rzepa
Chemical Markup, XML, and the World Wide Web. 6. CMLReact, an XML Vocabulary for Chemical Reactions. J. Chem. Inf. Model. 46 (1) (2006)
Rajarshi Guha, Michael T. Howard, Geoffrey R. Hutchison, Peter Murray-Rust, Henry S. Rzepa, Christoph Steinbeck, Jörg K. Wegner, Egon L. Willighagen
The Blue Obelisk-Interoperability in Chemical Informatics. J. Chem. Inf. Model. 46 (3) (2006)
Martin T. Dove, Toby O. H. White, Andrew M. Walker, Richard Paul Bruin, Kat F. Austen, Emilio Artacho, L. A. Sullivan, Mark Calleja, Matthew G. Tucker, Rik P. Tyer, Philip A. Couch, Kerstin Kleese van Dam, R. J. Allan, Ilian T. Todorov, Clovis Chapman, Wolfgang Emmerich, Arnaud Marmier, Steve C. Parker, M. O. Blanchard, C. Richard A. Catlow, Z. Du, N. de Leeuw, Gareth J. Lewis, Vassil N. Alexandrov, M. Alfredsson, J. P. Brodholt, Peter Murray-Rust
Computational Grids for Mid-Sized Collaborative Projects: The eMinerals Experience. e-Science (2006)
Gemma L. Holliday, Gail J. Bartlett, Daniel E. Almonacid, Noel M. O'Boyle, Peter Murray-Rust, Janet M. Thornton, John B. O. Mitchell
MACiE: a database of enzyme reaction mechanisms. Bioinform. 21 (23) (2005)
Peter Murray-Rust, John B. O. Mitchell, Henry S. Rzepa
Chemistry in Bioinformatics. BMC Bioinform. 6 (2005)
Peter Murray-Rust, John B. O. Mitchell, Henry S. Rzepa
Communication and re-use of chemical information in bioscience. BMC Bioinform. 6 (2005)
Peter Murray-Rust, Henry S. Rzepa
The Next Big Thing: From Hypermedia to Datuments. J. Digit. Inf. 5 (1) (2004)
Peter Murray-Rust, Henry S. Rzepa, Mark J. Williamson, Egon L. Willighagen
Chemical Markup, XML, and the World Wide Web. 5. Applications of Chemical Metadata in RSS Aggregators. J. Chem. Inf. Model. 44 (2) (2004)
Peter Murray-Rust, Henry S. Rzepa
Chemical Markup, XML, and the World Wide Web. 4. CML Schema. J. Chem. Inf. Comput. Sci. 43 (3) (2003)
Peter Murray-Rust, Henry S. Rzepa
XML for scientific publishing. OCLC Syst. Serv. 19 (4) (2003)
Peter Murray-Rust, Henry S. Rzepa
STMML. A markup language for scientific, technical and medical publishing. Data Sci. J. 1 (2) (2002)
Peter Murray-Rust, Henry S. Rzepa
Scientific publications in XML - towards a global knowledge base. Data Sci. J. 1 (1) (2002)
Georgios V. Gkoutos, Peter Murray-Rust, Henry S. Rzepa, Michael Wright
Chemical Markup, XML, and the World-Wide Web. 3. Toward a Signed Semantic Chemical Web of Trust. J. Chem. Inf. Comput. Sci. 41 (5) (2001)
Henry S. Rzepa, Peter Murray-Rust
A new publishing paradigm: STM articles as part of the semantic web. Learn. Publ. 14 (3) (2001)
Peter Murray-Rust, Henry S. Rzepa
Chemical Markup, XML and the World-Wide Web. 2. Information Objects and the CMLDOM. J. Chem. Inf. Comput. Sci. 41 (5) (2001)
Peter Murray-Rust, Henry S. Rzepa
Chemical Markup, XML, and the Worldwide Web. 1. Basic Principles. J. Chem. Inf. Comput. Sci. 39 (6) (1999)
Henry S. Rzepa, Peter Murray-Rust, Benjamin J. Whitaker
The Application of Chemical Multipurpose Internet Mail Extensions (Chemical MIME) Internet Standards to Electronic Mail and World Wide Web Information Exchange. J. Chem. Inf. Comput. Sci. 38 (6) (1998)
Peter Murray-Rust
JUMBO: An Object-Based XML Browser. World Wide Web J. 2 (4) (1997)
Peter Murray-Rust
Chemical Markup Language: A Simple Introduction to Structured Documents. World Wide Web J. 2 (4) (1997)