Patrick D. Schloss

Publication Activity (10 Years)

Years Active: 2006-2023
Publications (10 Years): 4

Top Topics

Interactive Data Mining

Environmental Conditions

Spatially Distributed

Supervised Machine Learning

Top Venues

PLoS Comput. Biol.

J. Open Source Softw.

Publications

Awan Afiaz, Andrey Ivanov, John Chamberlin, David Hanauer, Candace Savonen, Mary J. Goldman, Martin Morgan, Michael Reich, Alexander Getka, Aaron Holmes, Sarthak Pati, Dan Knight, Paul C. Boutros, Spyridon Bakas, J. Gregory Caporaso, Guilherme Del Fiol, Harry Hochheiser, Brian Haas, Patrick D. Schloss, James A. Eddy, Jake Albrecht, Andrey Fedorov, Levi Waldron, Ava M. Hoffman, Richard L. Bradshaw, Jeffrey T. Leek, Carrie Wright
Evaluation of software impact designed for biomedical research: Are we measuring what's meaningful? CoRR (2023)
Begüm D. Topçuoglu, Zena Lapp, Kelly L. Sovacool, Evan S. Snitkin, Jenna Wiens, Patrick D. Schloss
mikropml: User-Friendly R Package for Supervised Machine Learning Pipelines. J. Open Source Softw. 6 (61) (2021)
Ada K. Hagan, Nicholas A. Lesniak, Marcy J. Balunas, Lucas Bishop, William L. Close, Matthew D. Doherty, Amanda G. Elmore, Kaitlin J. Flynn, Geoffrey D. Hannigan, Charlie C. Koumpouras, Matthew L. Jenior, Ariangela J. Kozik, Kathryn McBride, Samara B. Rifkin, Joshua M. A. Stough, Kelly L. Sovacool, Marc A. Sze, Sarah Tomkovich, Begüm D. Topçuoglu, Patrick D. Schloss
Ten simple rules to increase computational skills among biologists with Code Clubs. PLoS Comput. Biol. 16 (8) (2020)
Geoffrey D. Hannigan, Melissa Beth Duhaime, Danai Koutra, Patrick D. Schloss
Biogeography and environmental conditions shape bacteriophage-bacteria networks across the human microbiome. PLoS Comput. Biol. 14 (4) (2018)
Dirk Gevers, Mihai Pop, Patrick D. Schloss, Curtis Huttenhower
Bioinformatics for the Human Microbiome Project. PLoS Comput. Biol. 8 (11) (2012)
Sahar Abubucker, Nicola Segata, Johannes Goll, Alyxandria M. Schubert, Jacques Izard, Brandi L. Cantarel, Beltran Rodriguez-Mueller, Jeremy Zucker, Mathangi Thiagarajan, Bernard Henrissat, Owen White, Scott T. Kelley, Barbara A. Methé, Patrick D. Schloss, Dirk Gevers, Makedonka Dautova Mitreva, Curtis Huttenhower
Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome. PLoS Comput. Biol. 8 (6) (2012)
Patrick J. Riss, Jacob M. Hooker, David L. Alexoff, Sung-Won Kim, Rene Hummerich, Valentina Ferrari, Patrick D. Schloss, Joanna S. Fowler, Frank Roesch, Franklin I. Aigbirhio
Automated GMP production of [11C]PR04.MZ via the captive solvent method and PET studies in non-human primates: A promising tracer for extrastriatal DAT imaging. NeuroImage 52 (Supplement-1) (2010)
Patrick D. Schloss
The Effects of Alignment Quality, Distance Calculation Method, Sequence Filtering, and Region on the Analysis of 16S rRNA Gene-Based Studies. PLoS Comput. Biol. 6 (7) (2010)
Patrick D. Schloss, Jo Handelsman
A statistical toolbox for metagenomics: assessing functional diversity in microbial communities. BMC Bioinform. 9 (2008)
Patrick D. Schloss, Jo Handelsman
Toward a Census of Bacteria in Soil. PLoS Comput. Biol. 2 (7) (2006)