Olga Ciccarelli

Publication Activity (10 Years)

Years Active: 2002-2023
Publications (10 Years): 15

Top Topics

Magnetic Resonance Imaging

Segmentation Of Medical Images

Top Venues

npj Digit. Medicine

Pattern Recognit.

Publications

Antonio Ricciardi, Francesco Grussu, Baris Kanber, Ferran Prados, Marios C. Yiannakas, Bhavana S. Solanky, Frank Riemer, Xavier Golay, Wallace Brownlee, Olga Ciccarelli, Daniel C. Alexander, Claudia A. M. Gandini Wheeler-Kingshott
Patterns of inflammation, microstructural alterations, and sodium accumulation define multiple sclerosis subtypes after 15 years from onset. Frontiers Neuroinformatics 17 (2023)
Le Zhang, Ryutaro Tanno, Moucheng Xu, Yawen Huang, Kevin Bronik, Chen Jin, Joseph Jacob, Yefeng Zheng, Ling Shao, Olga Ciccarelli, Frederik Barkhof, Daniel C. Alexander
Learning from multiple annotators for medical image segmentation. Pattern Recognit. 138 (2023)
Ioana Hill, Marco Palombo, Mathieu D. Santin, Francesca Branzoli, Anne-Charlotte Philippe, Demian Wassermann, Marie-Stephane Aigrot, Bruno Stankoff, Anne Baron-Van Evercooren, Mehdi Felfli, Dominique Langui, Hui Zhang, Stéphane Lehéricy, Alexandra Petiet, Daniel C. Alexander, Olga Ciccarelli, Ivana Drobnjak
Machine learning based white matter models with permeability: An experimental study in cuprizone treated in-vivo mouse model of axonal demyelination. NeuroImage 224 (2021)
Le Zhang, Ryutaro Tanno, Mou-Cheng Xu, Chen Jin, Joseph Jacob, Olga Ciccarelli, Frederik Barkhof, Daniel C. Alexander
Disentangling Human Error from the Ground Truth in Segmentation of Medical Images. CoRR (2020)
Le Zhang, Ryutaro Tanno, Kevin Bronik, Chen Jin, Parashkev Nachev, Frederik Barkhof, Olga Ciccarelli, Daniel C. Alexander
Learning to Segment When Experts Disagree. MICCAI (1) (2020)
Ferran Prados, Marcello Moccia, Aubrey Johnson, Marios C. Yiannakas, Francesco Grussu, Manuel Jorge Cardoso, Olga Ciccarelli, Sébastien Ourselin, Frederik Barkhof, Claudia A. M. Wheeler-Kingshott
Generalised boundary shift integral for longitudinal assessment of spinal cord atrophy. NeuroImage 209 (2020)
Baris Kanber, James K. Ruffle, M. Jorge Cardoso, Sébastien Ourselin, Olga Ciccarelli
Neurosense: deep sensing of full or near-full coverage head/brain scans in human magnetic resonance imaging. Neuroinformatics 18 (2) (2020)
Baris Kanber, Parashkev Nachev, Frederik Barkhof, Alberto Calvi, Jorge Cardoso, Rosa Cortese, Ferran Prados, Carole H. Sudre, Carmen Tur, Sébastien Ourselin, Olga Ciccarelli
Author Correction: High-dimensional detection of imaging response to treatment in multiple sclerosis. npj Digit. Medicine 2 (2019)
Baris Kanber, Parashkev Nachev, Frederik Barkhof, Alberto Calvi, Jorge Cardoso, Rosa Cortese, Ferran Prados, Carole H. Sudre, Carmen Tur, Sébastien Ourselin, Olga Ciccarelli
High-dimensional detection of imaging response to treatment in multiple sclerosis. npj Digit. Medicine 2 (2019)
Charley Gros, Benjamin De Leener, Atef Badji, Josefina Maranzano, Dominique Eden, Sara M. Dupont, Jason Talbott, Ren Zhuoquiong, Yaou Liu, Tobias Granberg, Russell Ouellette, Yasuhiko Tachibana, Masaaki Hori, Kouhei Kamiya, Lydia Chougar, Leszek Stawiarz, Jan Hillert, Elise Bannier, Anne Kerbrat, Gilles Edan, Pierre Labauge, Virginie Callot, Jean Pelletier, Bertrand Audoin, Henitsoa Rasoanandrianina, Jean-Christophe Brisset, Paola Valsasina, Maria Assunta Rocca, Massimo Filippi, Rohit Bakshi, Shahamat Tauhid, Ferran Prados, Marios C. Yiannakas, Hugh Kearney, Olga Ciccarelli, Seth A. Smith, Constantina Andrada Treaba, Caterina Mainero, Jennifer Lefeuvre, Daniel S. Reich, Govind Nair, Vincent Auclair, Donald G. McLaren, Allan R. Martin, Michael G. Fehlings, Shahabeddin Vahdat, Ali Khatibi, Julien Doyon, Timothy M. Shepherd, Erik Charlson, Sridar Narayanan, Julien Cohen-Adad
Automatic segmentation of the spinal cord and intramedullary multiple sclerosis lesions with convolutional neural networks. CoRR (2018)
Alexandra de Sitter, Martijn D. Steenwijk, Aurélie Ruet, Adriaan Versteeg, Yaou Liu, Ronald A. van Schijndel, Petra J. W. Pouwels, Iris D. Kilsdonk, Keith S. Cover, Bob W. van Dijk, Stefan Ropele, Maria Assunta Rocca, Marios C. Yiannakas, Mike P. Wattjes, Soheil Damangir, Giovanni B. Frisoni, Jaume Sastre-Garriga, Alex Rovira, Christian Enzinger, Massimo Filippi, Jette L. Frederiksen, Olga Ciccarelli, Ludwig Kappos, Frederik Barkhof, Hugo Vrenken
Performance of five research-domain automated WM lesion segmentation methods in a multi-center MS study. NeuroImage 163 (2017)
Aaron Carass, Snehashis Roy, Amod Jog, Jennifer L. Cuzzocreo, Elizabeth M. Sweeney, Adrian Gherman, Julia Button, James Nguyen, Ferran Prados, Carole H. Sudre, Manuel Jorge Cardoso, Niamh Cawley, Olga Ciccarelli, Claudia A. M. Wheeler-Kingshott, Sébastien Ourselin, Laurence Catanese, Hrishikesh Deshpande, Pierre Maurel, Olivier Commowick, Christian Barillot, Xavier Tomas-Fernandez
Longitudinal multiple sclerosis lesion segmentation: Resource and challenge. NeuroImage 148 (2017)
Gemma L. Nedjati-Gilani, Torben Schneider, Matt G. Hall, Niamh Cawley, Ioana Hill, Olga Ciccarelli, Ivana Drobnjak, Claudia A. M. Gandini Wheeler-Kingshott, Daniel C. Alexander
Machine learning based compartment models with permeability for white matter microstructure imaging. NeuroImage 150 (2017)
Ferran Prados, Manuel Jorge Cardoso, Baris Kanber, Olga Ciccarelli, Raju Kapoor, Claudia A. M. Wheeler-Kingshott, Sébastien Ourselin
A multi-time-point modality-agnostic patch-based method for lesion filling in multiple sclerosis. NeuroImage 139 (2016)
Ferran Prados, M. Jorge Cardoso, Niamh Cawley, Baris Kanber, Olga Ciccarelli, Claudia A. M. Wheeler-Kingshott, Sébastien Ourselin
Fully Automated Patch-Based Image Restoration: Application to Pathology Inpainting. BrainLes@MICCAI (2016)
Arman Eshaghi, Benedetta Bodini, Gerard R. Ridgway, Daniel García-Lorenzo, Daniel J. Tozer, Mohammad Ali Sahraian, Alan J. Thompson, Olga Ciccarelli
Temporal and spatial evolution of grey matter atrophy in primary progressive multiple sclerosis. NeuroImage 86 (2014)
Patrick W. Stroman, Claudia A. M. Wheeler-Kingshott, M. Bacon, J. M. Schwab, Rachael L. Bosma, Jonathan C. W. Brooks, D. W. Cadotte, T. Carlstedt, Olga Ciccarelli, Julien Cohen-Adad, Armin Curt, N. Evangelou, Michael G. Fehlings, Massimo Filippi, B. J. Kelley, Spyros S. Kollias, Alex L. MacKay, Carlo A. Porro, Seth A. Smith, S. M. Strittmatter, Paul E. Summers, Irene Tracey
The current state-of-the-art of spinal cord imaging: Methods. NeuroImage 84 (2014)
Claudia A. M. Wheeler-Kingshott, Patrick W. Stroman, J. M. Schwab, M. Bacon, Rachael L. Bosma, Jonathan C. W. Brooks, D. W. Cadotte, T. Carlstedt, Olga Ciccarelli, Julien Cohen-Adad, Armin Curt, N. Evangelou, Michael G. Fehlings, Massimo Filippi, B. J. Kelley, Spyros S. Kollias, Alex L. MacKay, Carlo A. Porro, Seth A. Smith, S. M. Strittmatter, Paul E. Summers, Alan J. Thompson, Irene Tracey
The current state-of-the-art of spinal cord imaging: Applications. NeuroImage 84 (2014)
Viktor Wottschel, Olga Ciccarelli, Declan T. Chard, David H. Miller, Daniel C. Alexander
Prediction of Second Neurological Attack in Patients with Clinically Isolated Syndrome Using Support Vector Machines. PRNI (2013)
Daniel J. Tozer, Declan T. Chard, Benedetta Bodini, Olga Ciccarelli, David H. Miller, Alan J. Thompson, Claudia A. M. Wheeler-Kingshott
Linking white matter tracts to associated cortical grey matter: A tract extension methodology. NeuroImage 59 (4) (2012)
Marios C. Yiannakas, Hugh Kearney, R. S. Samson, Declan T. Chard, Olga Ciccarelli, David H. Miller, Claudia A. M. Wheeler-Kingshott
Feasibility of grey matter and white matter segmentation of the upper cervical cord in vivo: A pilot study with application to magnetisation transfer measurements. NeuroImage 63 (3) (2012)
Philip P. Kwok, Olga Ciccarelli, Declan T. Chard, David H. Miller, Daniel C. Alexander
Predicting Clinically Definite Multiple Sclerosis from Onset Using SVM. MLINI (2011)
Laura Mancini, Olga Ciccarelli, F. Manfredonia, John S. Thornton, Federica Agosta, Frederik Barkhof, Christian F. Beckmann, Nicola De Stefano, Christian Enzinger, Franz Fazekas, Massimo Filippi, Achim Gass, Jochen G. Hirsch, Heidi Johansen-Berg, Ludwig Kappos, T. Korteweg, S. C. Manson, S. Marino, Paul M. Matthews, Xavier Montalban, Jackie Palace, Chris Polman, Maria Assunta Rocca, Stefan Ropele, Alex Rovira, C. Wegner, Karl J. Friston, Alan J. Thompson, Tarek A. Yousry
Short-term adaptation to a simple motor task: A physiological process preserved in multiple sclerosis. NeuroImage 45 (2) (2009)
Rose Bosnell, C. Wegner, Zsigmond Tamás Kincses, T. Korteweg, Federica Agosta, Olga Ciccarelli, Nicola De Stefano, Achim Gass, Jochen G. Hirsch, Heidi Johansen-Berg, Ludwig Kappos, Frederik Barkhof, Laura Mancini, F. Manfredonia, S. Marino, David H. Miller, Xavier Montalban, Jackie Palace, Maria Assunta Rocca, Christian Enzinger, Stefan Ropele, Alex Rovira, Stephen M. Smith, Alan J. Thompson, John S. Thornton, Tarek A. Yousry, Brandon J. Whitcher, Massimo Filippi, Paul M. Matthews
Reproducibility of fMRI in the clinical setting: Implications for trial designs. NeuroImage 42 (2) (2008)
Z. Khaleeli, Mara Cercignani, Bertrand Audoin, Olga Ciccarelli, David H. Miller, Alan J. Thompson
Localized grey matter damage in early primary progressive multiple sclerosis contributes to disability. NeuroImage 37 (1) (2007)
Stephen M. Smith, Mark Jenkinson, Heidi Johansen-Berg, Daniel Rueckert, Thomas E. Nichols, Clare E. Mackay, Kate E. Watkins, Olga Ciccarelli, M. Zaheer Cader, Paul M. Matthews, Timothy Edward John Behrens
Tract-based spatial statistics: Voxelwise analysis of multi-subject diffusion data. NeuroImage 31 (4) (2006)
Geoffrey J. M. Parker, Simona Luzzi, Daniel C. Alexander, Claudia A. M. Wheeler-Kingshott, Olga Ciccarelli, Matthew A. Lambon Ralph
Lateralization of ventral and dorsal auditory-language pathways in the human brain. NeuroImage 24 (3) (2005)
Philip A. Cook, Hui Zhang, Brian B. Avants, Paul A. Yushkevich, Daniel C. Alexander, James C. Gee, Olga Ciccarelli, Alan J. Thompson
An Automated Approach to Connectivity-Based Partitioning of Brain Structures. MICCAI (2005)
Ahmed T. Toosy, Olga Ciccarelli, Geoff J. M. Parker, Claudia A. M. Wheeler-Kingshott, David H. Miller, Alan J. Thompson
Characterizing function-structure relationships in the human visual system with functional MRI and diffusion tensor imaging. NeuroImage 21 (4) (2004)
Olga Ciccarelli, Ahmed T. Toosy, Geoffrey J. M. Parker, Claudia A. M. Gandini Wheeler-Kingshott, Gareth J. Barker, David H. Miller, Alan J. Thompson
Diffusion tractography based group mapping of major white-matter pathways in the human brain. NeuroImage 19 (4) (2003)
Olga Ciccarelli, Geoffrey J. M. Parker, Ahmed T. Toosy, Claudia A. M. Gandini Wheeler-Kingshott, Gareth J. Barker, Philip A. Boulby, David H. Miller, Alan J. Thompson
From diffusion tractography to quantitative white matter tract measures: a reproducibility study. NeuroImage 18 (2) (2003)
Geoffrey J. M. Parker, Klaas E. Stephan, Gareth J. Barker, James B. Rowe, David G. MacManus, Claudia A. M. Wheeler-Kingshott, Olga Ciccarelli, Richard E. Passingham, Rachel L. Spinks, Roger N. Lemon, Robert Turner
Initial Demonstration of in Vivo Tracing of Axonal Projections in the Macaque Brain and Comparison with the Human Brain Using Diffusion Tensor Imaging and Fast Marching Tractography. NeuroImage 15 (4) (2002)
Claudia A. M. Wheeler-Kingshott, Simon J. Hickman, Geoffrey J. M. Parker, Olga Ciccarelli, Mark R. Symms, David H. Miller, Gareth J. Barker
Investigating Cervical Spinal Cord Structure Using Axial Diffusion Tensor Imaging. NeuroImage 16 (1) (2002)