Timothy M. Shepherd

Publication Activity (10 Years)

Years Active: 2005-2023
Publications (10 Years): 9

Top Topics

Convolutional Neural Networks

Top Venues

Publications

Patryk Filipiak, Timothy M. Shepherd, Lee Basler, Anthony Zuccolotto, Dimitris G. Placantonakis, Walter Schneider, Fernando E. Boada, Steven H. Baete
Diffusion Phantom Study of Fiber Crossings at Varied Angles Reconstructed with ODF-Fingerprinting. CDMRI@MICCAI (2023)
Gabriel Girard, Jonathan Rafael-Patino, Raphaël Truffet, Dogu Baran Aydogan, Nagesh Adluru, Veena A. Nair, Vivek Prabhakaran, Barbara B. Bendlin, Andrew L. Alexander, Sara Bosticardo, Ilaria Gabusi, Mario Ocampo-Pineda, Matteo Battocchio, Zuzana Piskorova, Pietro Bontempi, Simona Schiavi, Alessandro Daducci, Aleksandra Stafiej, Dominika Ciupek, Fabian Bogusz, Tomasz Pieciak, Matteo Frigo, Sara Sedlar, Samuel Deslauriers-Gauthier, Ivana Kojcic, Mauro Zucchelli, Hiba Laghrissi, Yang Ji, Rachid Deriche, Kurt G. Schilling, Bennett A. Landman, Alberto Cacciola, Gianpaolo Antonio Basile, Salvatore Bertino, Nancy Newlin, Praitayini Kanakaraj, Francois Rheault, Patryk Filipiak, Timothy M. Shepherd, Ying-Chia Lin, Dimitris G. Placantonakis, Fernando E. Boada, Steven H. Baete, Erick Hernandez-Gutierrez, Alonso Ramirez-Manzanares, Ricardo Coronado-Leija, Pablo Stack-Sánchez, Luis Concha, Maxime Descoteaux, Sina Mansour L, Caio Seguin, Andrew Zalesky, Kenji Marshall, Erick Jorge Canales-Rodríguez, Ye Wu, Sahar Ahmad, Pew-Thian Yap, Antoine Théberge, Florence Gagnon, Frédéric Massi, Elda Fischi Gomez, Remy Gardier, Juan Luis Villarreal-Haro, Marco Pizzolato, Emmanuel Caruyer, Jean-Philippe Thiran
Tractography passes the test: Results from the diffusion-simulated connectivity (disco) challenge. NeuroImage 277 (2023)
Patryk Filipiak, Timothy M. Shepherd, Lee Basler, Anthony Zuccolotto, Dimitris G. Placantonakis, Walter Schneider, Fernando E. Boada, Steven H. Baete
Stepwise Stochastic Dictionary Adaptation Improves Microstructure Reconstruction with Orientation Distribution Function Fingerprinting. CDMRI@MICCAI (2022)
Georg Schramm, David Rigie, Thomas Vahle, Ahmadreza Rezaei, Koen Van Laere, Timothy M. Shepherd, Johan Nuyts, Fernando E. Boada
Approximating anatomically-guided PET reconstruction in image space using a convolutional neural network. NeuroImage 224 (2021)
Francesco Grussu, Marco Battiston, Jelle Veraart, Torben Schneider, Julien Cohen-Adad, Timothy M. Shepherd, Daniel C. Alexander, Els Fieremans, Dmitry S. Novikov, Claudia A. M. Gandini Wheeler-Kingshott
spinal cord MRI with unified signal readout and image denoising. NeuroImage 217 (2020)
Casey Vieni, Benjamin Ades-aron, Bettina Conti, Eric E. Sigmund, Peter Riviello, Timothy M. Shepherd, Yvonne W. Lui, Dmitry S. Novikov, Els Fieremans
Effect of intravoxel incoherent motion on diffusion parameters in normal brain. NeuroImage 204 (2020)
Steven H. Baete, Martijn A. Cloos, Ying-Chia Lin, Dimitris G. Placantonakis, Timothy M. Shepherd, Fernando E. Boada
Fingerprinting Orientation Distribution Functions in diffusion MRI detects smaller crossing angles. NeuroImage 198 (2019)
Charley Gros, Benjamin De Leener, Atef Badji, Josefina Maranzano, Dominique Eden, Sara M. Dupont, Jason Talbott, Ren Zhuoquiong, Yaou Liu, Tobias Granberg, Russell Ouellette, Yasuhiko Tachibana, Masaaki Hori, Kouhei Kamiya, Lydia Chougar, Leszek Stawiarz, Jan Hillert, Elise Bannier, Anne Kerbrat, Gilles Edan, Pierre Labauge, Virginie Callot, Jean Pelletier, Bertrand Audoin, Henitsoa Rasoanandrianina, Jean-Christophe Brisset, Paola Valsasina, Maria Assunta Rocca, Massimo Filippi, Rohit Bakshi, Shahamat Tauhid, Ferran Prados, Marios C. Yiannakas, Hugh Kearney, Olga Ciccarelli, Seth A. Smith, Constantina Andrada Treaba, Caterina Mainero, Jennifer Lefeuvre, Daniel S. Reich, Govind Nair, Vincent Auclair, Donald G. McLaren, Allan R. Martin, Michael G. Fehlings, Shahabeddin Vahdat, Ali Khatibi, Julien Doyon, Timothy M. Shepherd, Erik Charlson, Sridar Narayanan, Julien Cohen-Adad
Automatic segmentation of the spinal cord and intramedullary multiple sclerosis lesions with convolutional neural networks. CoRR (2018)
Ileana O. Jelescu, Magdalena Zurek, Kerryanne V. Winters, Jelle Veraart, Anjali Rajaratnam, Nathanael S. Kim, James S. Babb, Timothy M. Shepherd, Dmitry S. Novikov, Sungheon G. Kim, Els Fieremans
In vivo quantification of demyelination and recovery using compartment-specific diffusion MRI metrics validated by electron microscopy. NeuroImage 132 (2016)
Evren Özarslan, Cheng Guan Koay, Timothy M. Shepherd, Michal E. Komlosh, M. Okan Irfanoglu, Carlo Pierpaoli, Peter J. Basser
Mean apparent propagator (MAP) MRI: A novel diffusion imaging method for mapping tissue microstructure. NeuroImage 78 (2013)
Evren Özarslan, Timothy M. Shepherd, Cheng Guan Koay, Stephen J. Blackband, Peter J. Basser
Temporal scaling characteristics of diffusion as a new MRI contrast: Findings in rat hippocampus. NeuroImage 60 (2) (2012)
Timothy M. Shepherd, Jeremy J. Flint, Peter E. Thelwall, Greg J. Stanisz, Thomas H. Mareci, Anthony T. Yachnis, Stephen J. Blackband
Postmortem interval alters the water relaxation and diffusion properties of rat nervous tissue - Implications for MRI studies of human autopsy samples. NeuroImage 44 (3) (2009)
Angelos Barmpoutis, Baba C. Vemuri, Timothy M. Shepherd, John R. Forder
Tensor Splines for Interpolation and Approximation of DT-MRI With Applications to Segmentation of Isolated Rat Hippocampi. IEEE Trans. Medical Imaging 26 (11) (2007)
Angelos Barmpoutis, Bing Jian, Baba C. Vemuri, Timothy M. Shepherd
Order Tensors & Their Estimation from Diffusion Weighted MRI. IPMI (2007)
Timothy M. Shepherd, Bjorn Scheffler, Michael A. King, Greg J. Stanisz, Dennis A. Steindler, Stephen J. Blackband
MR microscopy of rat hippocampal slice cultures: A novel model for studying cellular processes and chronic perturbations to tissue microstructure. NeuroImage 30 (3) (2006)
Evren Özarslan, Timothy M. Shepherd, Baba C. Vemuri, Stephen J. Blackband, Thomas H. Mareci
Resolution of complex tissue microarchitecture using the diffusion orientation transform (DOT). NeuroImage 31 (3) (2006)
Evren Özarslan, Peter J. Basser, Timothy M. Shepherd, Peter E. Thelwall, Baba C. Vemuri, Stephen J. Blackband
Characterization of Anomalous Diffusion from MR Signal may be a New Probe to Tissue Microstructure. EMBC (2006)
Timothy M. Shepherd, Evren Özarslan, Michael A. King, Thomas H. Mareci, Stephen J. Blackband
Structural insights from high-resolution diffusion tensor imaging and tractography of the isolated rat hippocampus. NeuroImage 32 (4) (2006)
Evren Özarslan, Timothy M. Shepherd, Baba C. Vemuri, Stephen J. Blackband, Thomas H. Mareci
A nonparametric reconstruction and its matrix implementation for the diffusion orientation transform (DOT). ISBI (2006)
Evren Özarslan, Timothy M. Shepherd, Baba C. Vemuri, Stephen J. Blackband, Thomas H. Mareci
Fast Orientation Mapping from HARDI. MICCAI (2005)