Muaaz Gul Awan

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 12

Top Topics

Gpu Implementation

Mass Spectrometry

Parallel Processing

Sequence Alignment

Top Venues

Netw. Model. Anal. Health Informatics Bioinform.

Publications

Nan Ding, Pieter Maris, Hai Ah Nam, Taylor L. Groves, Muaaz Gul Awan, LeAnn Lindsey, Christopher S. Daley, Oguz Selvitopi, Leonid Oliker, Nicholas J. Wright, Samuel Williams
Evaluating the potential of disaggregated memory systems for HPC applications. Concurr. Comput. Pract. Exp. 36 (19) (2024)
Doru-Thom Popovici, Muaaz Gul Awan, Giulia Guidi, Rob Egan, Steven A. Hofmeyr, Leonid Oliker, Katherine A. Yelick
Designing Efficient SIMD Kernels for High Performance Sequence Alignment. IPDPS Workshops (2023)
Nan Ding, Pieter Maris, Hai Ah Nam, Taylor L. Groves, Muaaz Gul Awan, LeAnn Lindsey, Christopher S. Daley, Oguz Selvitopi, Leonid Oliker, Nicholas J. Wright
Evaluating the Potential of Disaggregated Memory Systems for HPC applications. CoRR (2023)
LeAnn Lindsey, Muhammad Haseeb, Hari Sundar, Muaaz Gul Awan
TANGO: A GPU optimized traceback approach for sequence alignment algorithms. SC Workshops (2023)
Muaaz Gul Awan, Steven A. Hofmeyr, Rob Egan, Nan Ding, Aydin Buluç, Jack Deslippe, Leonid Oliker, Katherine A. Yelick
metagenome assembly using GPUs. SC (2021)
Muaaz Gul Awan, Abdullah Gul Awan, Fahad Saeed
Benchmarking mass spectrometry based proteomics algorithms using a simulated database. Netw. Model. Anal. Health Informatics Bioinform. 10 (1) (2021)
Muhammad Haseeb, Nan Ding, Jack Deslippe, Muaaz Gul Awan
Evaluating Performance and Portability of a core bioinformatics kernel on multiple vendor GPUs. P3HPC@SC (2021)
Muaaz Gul Awan, Taban Eslami, Fahad Saeed
GPU-DAEMON: GPU algorithm design, data management & optimization template for array based big omics data. Comput. Biol. Medicine 101 (2018)
Taban Eslami, Muaaz Gul Awan, Fahad Saeed
GPU-PCC: A GPU Based Technique to Compute Pairwise Pearson's Correlation Coefficients for Big fMRI Data. BCB (2017)
Muaaz Gul Awan, Fahad Saeed
An Out-of-Core GPU based Dimensionality Reduction Algorithm for Big Mass Spectrometry Data and Its Application in Bottom-up Proteomics. BCB (2017)
Muaaz Gul Awan, Fahad Saeed
GPU-ArraySort: A Parallel, In-Place Algorithm for Sorting Large Number of Arrays. ICPP Workshops (2016)
Muaaz Gul Awan, Fahad Saeed
MS-REDUCE: an ultrafast technique for reduction of big mass spectrometry data for high-throughput processing. Bioinform. 32 (10) (2016)