Lukas Käll

Publication Activity (10 Years)

Years Active: 2005-2024
Publications (10 Years): 6

Top Topics

Mass Spectrometry

Protein Complexes

Top Venues

Nucleic Acids Res.

Publications

Jack Freestone, Lukas Käll, William Stafford Noble, Uri Keich
Semi-supervised Learning While Controlling the FDR with an Application to Tandem Mass Spectrometry Analysis. RECOMB (2024)
Gustavo S. Jeuken, Nicholas P. Tobin, Lukas Käll
Survival analysis of pathway activity as a prognostic determinant in breast cancer. PLoS Comput. Biol. 18 (3) (2022)
Markus Ekvall, Michael Höhle, Lukas Käll
Parallelized calculation of permutation tests. Bioinform. 36 (22-23) (2021)
Morteza Chalabi Hajkarim, Vasileios Tsiamis, Lukas Käll, Fabio Vandin, Veit Schwämmle
CoExpresso: assess the quantitative behavior of protein complexes in human cells. BMC Bioinform. 20 (1) (2019)
Heydar Maboudi Afkham, Xuanbin Qiu, Matthew The, Lukas Käll
Uncertainty estimation of predictions of peptides' chromatographic retention times in shotgun proteomics. Bioinform. 33 (4) (2017)
Konstantinos D. Tsirigos, Christoph Peters, Nanjiang Shu, Lukas Käll, Arne Elofsson
The TOPCONS web server for consensus prediction of membrane protein topology and signal peptides. Nucleic Acids Res. 43 (Webserver-Issue) (2015)
Viktor Granholm, William Stafford Noble, Lukas Käll
A cross-validation scheme for machine learning algorithms in shotgun proteomics. BMC Bioinform. 13 (S-16) (2012)
Lukas Käll, Olga Vitek
Computational Mass Spectrometry-Based Proteomics. PLoS Comput. Biol. 7 (12) (2011)
Lukas Käll, John D. Storey, William Stafford Noble
-values and posterior error probabilities. Bioinform. 25 (7) (2009)
Lukas Käll, John D. Storey, William Stafford Noble
Non-parametric estimation of posterior error probabilities associated with peptides identified by tandem mass spectrometry. ECCB (2008)
Sheila M. Reynolds, Lukas Käll, Michael Riffle, Jeff A. Bilmes, William Stafford Noble
Transmembrane Topology and Signal Peptide Prediction Using Dynamic Bayesian Networks. PLoS Comput. Biol. 4 (11) (2008)
Lukas Käll, Anders Krogh, Erik L. L. Sonnhammer
Advantages of combined transmembrane topology and signal peptide prediction - the Phobius web server. Nucleic Acids Res. 35 (Web-Server-Issue) (2007)
Lukas Käll, Anders Krogh, Erik L. L. Sonnhammer
An HMM posterior decoder for sequence feature prediction that includes homology information. ISMB (Supplement of Bioinformatics) (2005)