L. Aravind

Publication Activity (10 Years)

Years Active: 1998-2018
Publications (10 Years): 1

Top Topics

Domain Independent

Structural Motifs

Protein Families

Tensor Factorization

Top Venues

Publications

Rati Verma, Kurt M. Reichermeier, A. Maxwell Burroughs, Robert S. Oania, Justin M. Reitsma, L. Aravind, Raymond J. Deshaies
Vms1 and ANKZF1 peptidyl-tRNA hydrolases release nascent chains from stalled ribosomes. Nat. 557 (7705) (2018)
Padmaja Natarajan, Marco Punta, Abhinav Kumar, Andrew P. Yeh, Adam Godzik, L. Aravind
Structure and sequence analyses of Bacteroides proteins BVU_4064 and BF1687 reveal presence of two novel predominantly-beta domains, predicted to be involved in lipid and cell surface interactions. BMC Bioinform. 16 (2015)
Debanu Das, Alexey G. Murzin, Neil D. Rawlings, Robert D. Finn, Penelope Coggill, Alex Bateman, Adam Godzik, L. Aravind
Structure and computational analysis of a novel protein with metallopeptidase-like and circularly permuted winged-helix-turn-helix domains reveals a possible role in modified polysaccharide biosynthesis. BMC Bioinform. 15 (2014)
Ruth Y. Eberhardt, Yuanyuan Chang, Alex Bateman, Alexey G. Murzin, Herbert L. Axelrod, William C. Hwang, L. Aravind
Filling out the structural map of the NTF2-like superfamily. BMC Bioinform. 14 (2013)
William C. Hwang, Constantina Bakolitsa, Marco Punta, Penelope Coggill, Alex Bateman, Herbert L. Axelrod, Neil D. Rawlings, Mayya Sedova, Scott N. Peterson, Ruth Y. Eberhardt, L. Aravind, Jaime Pascual, Adam Godzik
LUD, a new protein domain associated with lactate utilization. BMC Bioinform. 14 (2013)
Penelope Coggill, Ruth Y. Eberhardt, Robert D. Finn, Yuanyuan Chang, Lukasz Jaroszewski, Adam Godzik, Debanu Das, Qingping Xu, Herbert L. Axelrod, L. Aravind, Alexey G. Murzin, Alex Bateman
Two Pfam protein families characterized by a crystal structure of protein lpg2210 from Legionella pneumophila. BMC Bioinform. 14 (2013)
Dapeng Zhang, Lakshminarayan M. Iyer, L. Aravind
Bacterial GRAS domain proteins throw new light on gibberellic acid response mechanisms. Bioinform. 28 (19) (2012)
Robson Francisco de Souza, L. Aravind
UMA and MABP domains throw light on receptor endocytosis and selection of endosomal cargoes. Bioinform. 26 (12) (2010)
Thiago M. Venancio, L. Aravind
CYSTM, a novel cysteine-rich transmembrane module with a role in stress tolerance across eukaryotes. Bioinform. 26 (2) (2010)
Saraswathi Abhiman, Lakshminarayan M. Iyer, L. Aravind
BEN: a novel domain in chromatin factors and DNA viral proteins. Bioinform. 24 (4) (2008)
Robson Francisco de Souza, Vivek Anantharaman, Sandro José de Souza, L. Aravind, Frederico J. Gueiros-Filho
AMIN domains have a predicted role in localization of diverse periplasmic protein complexes. Bioinform. 24 (21) (2008)
Lakshminarayan M. Iyer, Vivek Anantharaman, L. Aravind
The DOMON domains are involved in heme and sugar recognition. Bioinform. 23 (20) (2007)
Raja Jothi, Teresa M. Przytycka, L. Aravind
Discovering functional linkages and uncharacterized cellular pathways using phylogenetic profile comparisons: a comprehensive assessment. BMC Bioinform. 8 (2007)
Lakshminarayan M. Iyer, A. Maxwell Burroughs, L. Aravind
The ASCH superfamily: novel domains with a fold related to the PUA domain and a potential role in RNA metabolism. Bioinform. 22 (3) (2006)
Vivek Anantharaman, L. Aravind
MEDS and PocR are novel domains with a predicted role in sensing simple hydrocarbon derivatives in prokaryotic signal transduction systems. Bioinform. 21 (12) (2005)
Steven A. Sullivan, L. Aravind, Izabela Makalowska, Andreas D. Baxevanis, David Landsman
The Histone Database: a comprehensive WWW resource for histones and histone fold-containing proteins. Nucleic Acids Res. 28 (1) (2000)
Alejandro A. Schäffer, Yuri I. Wolf, Chris P. Ponting, Eugene V. Koonin, L. Aravind, Stephen F. Altschul
IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices. Bioinform. 15 (12) (1999)
L. Aravind
An evolutionary classification of the metallo-beta-lactamase fold proteins. Silico Biol. 1 (2) (1998)