Raja Jothi

Publication Activity (10 Years)

Years Active: 2003-2016
Publications (10 Years): 1

Top Topics

Training Examples

Ensemble Learning

Abnormal Patterns

Top Venues

PLoS Comput. Biol.

Publications

Pengyi Yang, Sean J. Humphrey, David E. James, Yee Hwa Yang, Raja Jothi
Positive-unlabeled ensemble learning for kinase substrate prediction from dynamic phosphoproteomics data. Bioinform. 32 (2) (2016)
Pengyi Yang, Xiaofeng Zheng, Vivek Jayaswal, Guang Hu, Jean Yee Hwa Yang, Raja Jothi
Knowledge-Based Analysis for Detecting Key Signaling Events from Time-Series Phosphoproteomics Data. PLoS Comput. Biol. 11 (8) (2015)
Sailu Yellaboina, Asba Tasneem, Dmitri V. Zaykin, Balaji Raghavachari, Raja Jothi
DOMINE: a comprehensive collection of known and predicted domain-domain interactions. Nucleic Acids Res. 39 (Database-Issue) (2011)
Raja Jothi, Balaji Raghavachari
Improved approximation algorithms for the single-sink buy-at-bulk network design problems. J. Discrete Algorithms 7 (2) (2009)
Mei Liu, Xue-wen Chen, Raja Jothi
Knowledge-guided inference of domain-domain interactions from incomplete protein-protein interaction networks. Bioinform. 25 (19) (2009)
Raja Jothi, Balaji Raghavachari
Degree-bounded minimum spanning trees. Discret. Appl. Math. 157 (5) (2009)
Balaji Raghavachari, Asba Tasneem, Teresa M. Przytycka, Raja Jothi
DOMINE: a database of protein domain interactions. Nucleic Acids Res. 36 (Database-Issue) (2008)
Raja Jothi, Balaji Raghavachari
Approximating the k-traveling repairman problem with repairtimes. J. Discrete Algorithms 5 (2) (2007)
Raja Jothi, Teresa M. Przytycka, L. Aravind
Discovering functional linkages and uncharacterized cellular pathways using phylogenetic profile comparisons: a comprehensive assessment. BMC Bioinform. 8 (2007)
Chao Gong, Kamil Saraç, Ovidiu Daescu, Balaji Raghavachari, Raja Jothi
Load-balanced agent activation for value-added network services. Comput. Commun. 29 (11) (2006)
Raja Jothi, Elena Zotenko, Asba Tasneem, Teresa M. Przytycka
COCO-CL: hierarchical clustering of homology relations based on evolutionary correlations. Bioinform. 22 (7) (2006)
Elena Zotenko, Katia S. Guimarães, Raja Jothi, Teresa M. Przytycka
Decomposition of overlapping protein complexes: A graph theoretical method for analyzing static and dynamic protein associations. Algorithms Mol. Biol. 1 (2006)
Raja Jothi, Maricel G. Kann, Teresa M. Przytycka
Predicting protein-protein interaction by searching evolutionary tree automorphism space. ISMB (Supplement of Bioinformatics) (2005)
Elena Zotenko, Katia S. Guimarães, Raja Jothi, Teresa M. Przytycka
Decomposition of Overlapping Protein Complexes: A Graph Theoretical Method for Analyzing Static and Dynamic Protein Associations. Systems Biology and Regulatory Genomics (2005)
Raja Jothi, Balaji Raghavachari
Approximation algorithms for the capacitated minimum spanning tree problem and its variants in network design. ACM Trans. Algorithms 1 (2) (2005)
Raja Jothi, Balaji Raghavachari
Improved Approximation Algorithms for the Single-Sink Buy-at-Bulk Network Design Problems. SWAT (2004)
Ovidiu Daescu, Raja Jothi, Balaji Raghavachari, Kamil Saraç
Optimal placement of NAK-suppressing agents for reliable multicast: a partial deployment case. SAC (2004)
Raja Jothi, Balaji Raghavachari
Survivable network design: the capacitated minimum spanning network problem. Inf. Process. Lett. 91 (4) (2004)
Raja Jothi, Balaji Raghavachari
Minimum Latency Tours and the k-Traveling Repairmen Problem. LATIN (2004)
Vinod Vokkarane, Jianping Wang, Xiangtong Qi, Raja Jothi, Balaji Raghavachari, Jason P. Jue
Dynamic dual-homing protection in WDM mesh networks. ICC (2004)
Raja Jothi, Balaji Raghavachari
Approximation Algorithms for the Capacitated Minimum Spanning Tree Problem and Its Variants in Network Design. ICALP (2004)
Chao Gong, Ovidiu Daescu, Raja Jothi, Balaji Raghavachari, Kamil Saraç
Load balancing for reliable multicast. Communications, Internet, and Information Technology (2004)
Raja Jothi, Balaji Raghavachari
Degree-bounded minimum spanning trees. CCCG (2004)
Raja Jothi, Balaji Raghavachari, Subramanian Varadarajan
A 5/4-approximation algorithm for minimum 2-edge-connectivity. SODA (2003)