Keehyoung Joo

Publication Activity (10 Years)

Years Active: 2008-2023
Publications (10 Years): 8

Top Topics

Experimentally Determined

Optimization Algorithm

Protein Structure

Top Venues

J. Chem. Inf. Model.

J. Comput. Chem.

Publications

Jae-Won Lee, Jong-Hyun Won, Seonggwang Jeon, Yujin Choo, Yubin Yeon, Jin-Seon Oh, Minsoo Kim, Seonhwa Kim, InSuk Joung, Cheongjae Jang, Sung Jong Lee, Tae Hyun Kim, Kyong Hwan Jin, Giltae Song, Eun-Sol Kim, Jejoong Yoo, Eunok Paek, Yung-Kyun Noh, Keehyoung Joo
DeepFold: enhancing protein structure prediction through optimized loss functions, improved template features, and re-optimized energy function. Bioinform. 39 (12) (2023)
Jimin Park, InSuk Joung, Keehyoung Joo, Jooyoung Lee
Application of conformational space annealing to the protein structure modeling using cryo-EM maps. J. Comput. Chem. 44 (30) (2023)
Agnieszka S. Karczynska, Karolina Zieba, Urszula Uciechowska, Magdalena A. Mozolewska, Pawel Krupa, Emilia A. Lubecka, Agnieszka G. Lipska, Celina Sikorska, Sergey A. Samsonov, Adam K. Sieradzan, Artur Gieldon, Adam Liwo, Rafal Slusarz, Magdalena Slusarz, Jooyoung Lee, Keehyoung Joo, Cezary Czaplewski
Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13. J. Chem. Inf. Model. 60 (3) (2020)
Seung Hwan Hong, Keehyoung Joo, Jooyoung Lee
ConDo: protein domain boundary prediction using coevolutionary information. Bioinform. 35 (14) (2019)
InSuk Joung, Jong Yun Kim, Steven P. Gross, Keehyoung Joo, Jooyoung Lee
Conformational Space Annealing explained: A general optimization algorithm, with diverse applications. Comput. Phys. Commun. 223 (2018)
Agnieszka S. Karczynska, Cezary Czaplewski, Pawel Krupa, Magdalena A. Mozolewska, Keehyoung Joo, Jooyoung Lee, Adam Liwo
Ergodicity and model quality in template-restrained canonical and temperature/Hamiltonian replica exchange coarse-grained molecular dynamics simulations of proteins. J. Comput. Chem. 38 (31) (2017)
Seungryong Heo, Juyong Lee, Keehyoung Joo, Hang-Cheol Shin, Jooyoung Lee
Protein Loop Structure Prediction Using Conformational Space Annealing. J. Chem. Inf. Model. 57 (5) (2017)
Magdalena A. Mozolewska, Pawel Krupa, Bartlomiej Zaborowski, Adam Liwo, Jooyoung Lee, Keehyoung Joo, Cezary Czaplewski
Use of Restraints from Consensus Fragments of Multiple Server Models To Enhance Protein-Structure Prediction Capability of the UNRES Force Field. J. Chem. Inf. Model. 56 (11) (2016)
Pawel Krupa, Magdalena A. Mozolewska, Keehyoung Joo, Jooyoung Lee, Cezary Czaplewski, Adam Liwo
Prediction of Protein Structure by Template-Based Modeling Combined with the UNRES Force Field. J. Chem. Inf. Model. 55 (6) (2015)
Juyong Lee, Kiho Lee, InSuk Joung, Keehyoung Joo, Bernard R. Brooks, Jooyoung Lee
Sigma-RF: prediction of the variability of spatial restraints in template-based modeling by random forest. BMC Bioinform. 16 (2015)
Joo-Hyun Seo, Jihyang Park, Eun-Mi Kim, Juhan Kim, Keehyoung Joo, Jooyoung Lee, Byung-Gee Kim
Subgrouping Automata: Automatic sequence subgrouping using phylogenetic tree-based optimum subgrouping algorithm. Comput. Biol. Chem. 48 (2014)
Jinwoo Lee, Keehyoung Joo, Seung-Yeon Kim, Jooyoung Lee
Re-examination of structure optimization of off-lattice protein AB models by conformational space annealing. J. Comput. Chem. 29 (14) (2008)