Joseph M. Reinhardt

Publication Activity (10 Years)

Years Active: 1993-2024
Publications (10 Years): 25

Top Topics

Automatic Segmentation

Image Registration

Top Venues

Medical Image Anal.

IEEE Trans. Medical Imaging

Publications

Muhammad F. A. Chaudhary, Sarah E. Gerard, Gary E. Christensen, Christopher B. Cooper, Joyce D. Schroeder, Eric A. Hoffman, Joseph M. Reinhardt
LungViT: Ensembling Cascade of Texture Sensitive Hierarchical Vision Transformers for Cross-Volume Chest CT Image-to-Image Translation. IEEE Trans. Medical Imaging 43 (7) (2024)
Diedre S. Carmo, Rosarie A. Tudas, Alejandro P. Comellas, Letícia Rittner, Roberto de Alencar Lotufo, Joseph M. Reinhardt, Sarah E. Gerard
Automatic segmentation of lung findings in CT and application to Long COVID. CoRR (2023)
Diedre S. Carmo, Jean Ribeiro, Alejandro P. Comellas, Joseph M. Reinhardt, Sarah E. Gerard, Letícia Rittner, Roberto de Alencar Lotufo
MEDPSeg: End-to-end segmentation of pulmonary structures and lesions in computed tomography. CoRR (2023)
Muhammad F. A. Chaudhary, Seyed Soheil Hosseini, R. Graham Barr, Joseph M. Reinhardt, Eric A. Hoffman, Sarah E. Gerard
Bridging the Task Barriers: Online Knowledge Distillation Across Tasks for Semi-supervised Mediastinal Segmentation in CT. MLMI@MICCAI (1) (2023)
Yue Pan, Di Wang, Muhammad F. A. Chaudhary, Wei Shao, Sarah E. Gerard, Oguz C. Durumeric, Surya P. Bhatt, R. Graham Barr, Eric A. Hoffman, Joseph M. Reinhardt, Gary E. Christensen
Robust Measures of Image-Registration-Derived Lung Biomechanics in SPIROMICS. J. Imaging 8 (11) (2022)
Muhammad F. A. Chaudhary, Sarah E. Gerard, Di Wang, Gary E. Christensen, Christopher B. Cooper, Joyce D. Schroeder, Eric A. Hoffman, Joseph M. Reinhardt
Single Volume Lung Biomechanics from Chest Computed Tomography Using a Mode Preserving Generative Adversarial Network. ISBI (2022)
Di Wang, Yue Pan, Oguz C. Durumeric, Joseph M. Reinhardt, Eric A. Hoffman, Joyce D. Schroeder, Gary E. Christensen
PLOSL: Population learning followed by one shot learning pulmonary image registration using tissue volume preserving and vesselness constraints. Medical Image Anal. 79 (2022)
Wei Shao, Yue Pan, Oguz C. Durumeric, Joseph M. Reinhardt, John E. Bayouth, Mirabela Rusu, Gary E. Christensen
Geodesic density regression for correcting 4DCT pulmonary respiratory motion artifacts. Medical Image Anal. 72 (2021)
Xinzi He, Jia Guo, Xuzhe Zhang, Hanwen Bi, Sarah E. Gerard, David W. Kaczka, Amin Motahari, Eric A. Hoffman, Joseph M. Reinhardt, R. Graham Barr, Elsa D. Angelini, Andrew Laine
Recursive Refinement Network for Deformable Lung Registration between Exhale and Inhale CT Scans. CoRR (2021)
Muhammad F. A. Chaudhary, Sarah E. Gerard, Di Wang, Gary E. Christensen, Christopher B. Cooper, Joyce D. Schroeder, Eric A. Hoffman, Joseph M. Reinhardt
Single volume lung biomechanics from chest computed tomography using a mode preserving generative adversarial network. CoRR (2021)
Patrick Wilhelm, Joseph M. Reinhardt, Douglas van Daele
A Deep Learning Approach to Video Fluoroscopic Swallowing Exam Classification. ISBI (2020)
Zachary W. Althof, Sarah E. Gerard, Yue Pan, Gary E. Christensen, Eric A. Hoffman, Joseph M. Reinhardt
Automatic Quantification of Pulmonary Fissure Integrity: A Repeatability Analysis. ISBI (2020)
Sarah E. Gerard, Joseph M. Reinhardt, Gary E. Christensen, Raúl San José Estépar
Estimating Local Tissue Expansion in Thoracic Computed Tomography Images Using Convolutional Neural Networks. ISBI (2020)
Muhammad F. A. Chaudhary, Yue Pan, Di Wang, Sandeep Bodduluri, Surya P. Bhatt, Alejandro P. Comellas, Eric A. Hoffman, Gary E. Christensen, Joseph M. Reinhardt
Registration-Invariant Biomechanical Features for Disease Staging of COPD in SPIROMICS. TIA@MICCAI (2020)
Sarah E. Gerard, Jacob Herrmann, David W. Kaczka, Guido Musch, Ana Fernandez-Bustamante, Joseph M. Reinhardt
Multi-resolution convolutional neural networks for fully automated segmentation of acutely injured lungs in multiple species. Medical Image Anal. 60 (2020)
Wei Shao, Taylor J. Patton, Sarah E. Gerard, Yue Pan, Joseph M. Reinhardt, Oguz C. Durumeric, John E. Bayouth, Gary E. Christensen
N-Phase Local Expansion Ratio for Characterizing Out-of-Phase Lung Ventilation. IEEE Trans. Medical Imaging 39 (6) (2020)
Sarah E. Gerard, Jacob Herrmann, Yi Xin, Kevin T. Martin, Emanuele Rezoagli, Davide Ippolito, Giacomo Bellani, Maurizio Cereda, Junfeng Guo, Eric A. Hoffman, David W. Kaczka, Joseph M. Reinhardt
CT Image Segmentation for Inflamed and Fibrotic Lungs Using a Multi-Resolution Convolutional Neural Network. CoRR (2020)
Yue Pan, Gary E. Christensen, Oguz C. Durumeric, Sarah E. Gerard, Surya P. Bhatt, R. Graham Barr, Eric A. Hoffman, Joseph M. Reinhardt
Assessment of Lung Biomechanics in COPD Using Image Registration. ISBI (2020)
Sarah E. Gerard, Taylor J. Patton, Gary E. Christensen, John E. Bayouth, Joseph M. Reinhardt
FissureNet: A Deep Learning Approach For Pulmonary Fissure Detection in CT Images. IEEE Trans. Medical Imaging 38 (1) (2019)
Sarah E. Gerard, Joseph M. Reinhardt
Pulmonary Lobe Segmentation Using A Sequence of Convolutional Neural Networks For Marginal Learning. ISBI (2019)
Wei Shao, Taylor J. Patton, Sarah E. Gerard, Yue Pan, Joseph M. Reinhardt, John E. Bayouth, Oguz C. Durumeric, Gary E. Christensen
Detecting Out-of-Phase Ventilation Using 4DCT to Improve Radiation Therapy for Lung Cancer. RAMBO+BIA+TIA@MICCAI (2018)
Sarah E. Gerard, Jacob Herrmann, David W. Kaczka, Joseph M. Reinhardt
Transfer Learning for Segmentation of Injured Lungs Using Coarse-to-Fine Convolutional Neural Networks. RAMBO+BIA+TIA@MICCAI (2018)
Wei Shao, Sarah E. Gerard, Yue Pan, Taylor J. Patton, Joseph M. Reinhardt, Oguz C. Durumeric, John E. Bayouth, Gary E. Christensen
Sensitivity analysis of Jacobian determinant used in treatment planning for lung cancer. Medical Imaging: Image Processing (2018)
Yue Pan, Gary E. Christensen, Oguz C. Durumeric, Sarah E. Gerard, Joseph M. Reinhardt, Geoffrey D. Hugo
Current-and Varifold-Based Registration of Lung Vessel and Airway Trees. CVPR Workshops (2016)
Bowen Zhao, Gary E. Christensen, Joo Hyun Song, Yue Pan, Sarah E. Gerard, Joseph M. Reinhardt, Kaifang Du, Taylor Patton, John E. Bayouth, Geoffrey D. Hugo
Tissue-Volume Preserving Deformable Image Registration for 4DCT Pulmonary Images. CVPR Workshops (2016)
Li Tang, Meindert Niemeijer, Joseph M. Reinhardt, Mona Kathryn Garvin, Michael D. Abràmoff
Splat Feature Classification With Application to Retinal Hemorrhage Detection in Fundus Images. IEEE Trans. Medical Imaging 32 (2) (2013)
Vinayak S. Joshi, Mona Kathryn Garvin, Joseph M. Reinhardt, Michael D. Abràmoff
Automated artery-venous classification of retinal blood vessels based on structural mapping method. Medical Imaging: Computer-Aided Diagnosis (2012)
Xiayu Xu, Michael D. Abràmoff, Geir Bertelsen, Joseph M. Reinhardt
Retinal vessel width measurement at branching points using an improved electric field theory-based graph approach. Medical Imaging: Image Processing (2012)
Pechin Lo, Bram van Ginneken, Joseph M. Reinhardt, Tarunashree Yavarna, Pim A. de Jong, Benjamin Irving, Catalin I. Fetita, Margarete Ortner, Romulo Pinho, Jan Sijbers, Marco Feuerstein, Anna Fabijanska, Christian Bauer, Reinhard Beichel, Carlos S. Mendoza, Rafael Wiemker, Jaesung Lee, Anthony P. Reeves, Silvia Born, Oliver Weinheimer, Eva M. van Rikxoort, Juerg Tschirren, Kensaku Mori, Benjamin Odry, David P. Naidich, Ieneke Hartmann, Eric A. Hoffman, Mathias Prokop, Jesper Johannes Holst Pedersen, Marleen de Bruijne
Extraction of Airways From CT (EXACT'09). IEEE Trans. Medical Imaging 31 (11) (2012)
Kunlin Cao, Gary E. Christensen, Kai Ding, Kaifang Du, Madhavan L. Raghavan, Ryan E. Amelon, Kimberly M. Baker, Eric A. Hoffman, Joseph M. Reinhardt
Tracking Regional Tissue Volume and Function Change in Lung Using Image Registration. Int. J. Biomed. Imaging 2012 (2012)
Kunlin Cao, Kai Ding, Joseph M. Reinhardt, Gary E. Christensen
Improving Intensity-Based Lung CT Registration Accuracy Utilizing Vascular Information. Int. J. Biomed. Imaging 2012 (2012)
Kai Ding, W. Miller, Kunlin Cao, Gary E. Christensen, Joseph M. Reinhardt, S. Benedict, B. Libby, K. Sheng
Quantification of regional lung ventilation from tagged hyperpolarized helium-3 MRI. ISBI (2011)
Xiayu Xu, Meindert Niemeijer, Qi Song, Mona Kathryn Garvin, Joseph M. Reinhardt, Michael D. Abràmoff
Retinal vessel width measurements based on a graph-theoretic method. ISBI (2011)
Vinayak S. Joshi, Mona Kathryn Garvin, Joseph M. Reinhardt, Michael D. Abràmoff
Identification and reconnection of interrupted vessels in retinal vessel segmentation. ISBI (2011)
Vinayak S. Joshi, Mona Kathryn Garvin, Joseph M. Reinhardt, Michael D. Abràmoff
Automated method for the identification and analysis of vascular tree structures in retinal vessel network. Medical Imaging: Computer-Aided Diagnosis (2011)
Keelin Murphy, Bram van Ginneken, Joseph M. Reinhardt, Sven Kabus, Kai Ding, Xiang Deng, Kunlin Cao, Kaifang Du, Gary E. Christensen, Vincent Garcia, Tom Vercauteren, Nicholas Ayache, Olivier Commowick, Grégoire Malandain, Ben Glocker, Nikos Paragios, Nassir Navab, Vladlena Gorbunova, Jon Sporring, Marleen de Bruijne, Xiao Han, Mattias P. Heinrich, Julia A. Schnabel, Mark Jenkinson, Cristian Lorenz, Marc Modat, Jamie McClelland, Sébastien Ourselin, Sascha E. A. Muenzing, Max A. Viergever, Dante De Nigris, D. Louis Collins, Tal Arbel, Marta Peroni, Rui Li, Gregory C. Sharp, Alexander Schmidt-Richberg, Jan Ehrhardt, René Werner, Dirk Smeets, Dirk Loeckx, Gang Song, Nicholas J. Tustison, Brian B. Avants, James C. Gee, Marius Staring, Stefan Klein, Berend C. Stoel, Martin Urschler, Manuel Werlberger, Jef Vandemeulebroucke, Simon Rit, David Sarrut, Josien P. W. Pluim
Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge. IEEE Trans. Medical Imaging 30 (11) (2011)
Panfang Hua, Qi Song, Milan Sonka, Eric A. Hoffman, Joseph M. Reinhardt
Segmentation of pathological and diseased lung tissue in CT images using a graph-search algorithm. ISBI (2011)
Xiayu Xu, Mona Kathryn Garvin, Michael D. Abràmoff, Joseph M. Reinhardt
Simultaneous automatic detection of optic disc and fovea on fundus photographs. Medical Imaging: Image Processing (2011)
Kai Ding, Kaifang Du, Kunlin Cao, Gary E. Christensen, Joseph M. Reinhardt
Time-varying lung ventilation analysis of 4DCT using image registration. ICASSP (2011)
Kaifang Du, Kai Ding, Kunlin Cao, John E. Bayouth, Gary E. Christensen, Joseph M. Reinhardt
Registration-based measurement of regional expiration volume ratio using dynamic 4DCT imaging. ISBI (2011)
Xiayu Xu, Meindert Niemeijer, Qi Song, Milan Sonka, Mona Kathryn Garvin, Joseph M. Reinhardt, Michael D. Abràmoff
Vessel Boundary Delineation on Fundus Images Using Graph-Based Approach. IEEE Trans. Medical Imaging 30 (6) (2011)
Sangyeol Lee, Michael D. Abràmoff, Joseph M. Reinhardt
Retinal atlas statistics from color fundus images. Medical Imaging: Image Processing (2010)
Sangyeol Lee, Joseph M. Reinhardt, Philippe C. Cattin, Michael D. Abràmoff
Objective and expert-independent validation of retinal image registration algorithms by a projective imaging distortion model. Medical Image Anal. 14 (4) (2010)
Kunlin Cao, Kai Ding, Gary E. Christensen, Madhavan L. Raghavan, Ryan E. Amelon, Joseph M. Reinhardt
Unifying Vascular Information in Intensity-Based Nonrigid Lung CT Registration. WBIR (2010)
Kunlin Cao, Kai Ding, Gary E. Christensen, Joseph M. Reinhardt
Tissue volume and vesselness measure preserving nonrigid registration of lung CT images. Medical Imaging: Image Processing (2010)
Vinayak S. Joshi, Joseph M. Reinhardt, Michael D. Abràmoff
Automated measurement of retinal blood vessel tortuosity. Medical Imaging: Computer-Aided Diagnosis (2010)
Kai Ding, Youbing Yin, Kunlin Cao, Gary E. Christensen, Ching-Long Lin, Eric A. Hoffman, Joseph M. Reinhardt
Evaluation of Lobar Biomechanics during Respiration Using Image Registration. MICCAI (1) (2009)
Soumik Ukil, Joseph M. Reinhardt
Anatomy-Guided Lung Lobe Segmentation in X-Ray CT Images. IEEE Trans. Medical Imaging 28 (2) (2009)
Joseph M. Reinhardt, Kai Ding, Kunlin Cao, Gary E. Christensen, Eric A. Hoffman, Shalmali V. Bodas
Registration-based estimates of local lung tissue expansion compared to xenon CT measures of specific ventilation. Medical Image Anal. 12 (6) (2008)
Sangyeol Lee, Michael D. Abràmoff, Joseph M. Reinhardt
Retinal image mosaicing using the radial distortion correction model. Medical Imaging: Image Processing (2008)
Patrick M. Kellen, Darci Becker, Joseph M. Reinhardt, Douglas van Daele
Tracking the hyoid bone in videofluoroscopic swallowing studies. Medical Imaging: Image Processing (2008)
Jessica de Ryk, Jamie Weydert, Gary E. Christensen, Jacqueline Thiesse, Eman Namati, Joseph M. Reinhardt, Eric A. Hoffman, Geoffrey McLennan
Three-dimensional histopathology of lung cancer with multimodality image registration. Medical Imaging: Image Processing (2007)
Sangyeol Lee, Michael D. Abràmoff, Joseph M. Reinhardt
Feature-based pairwise retinal image registration by radial distortion correction. Medical Imaging: Image Processing (2007)
Jerome Zhengrong Liang, Hongbing Lu, Dimitris N. Metaxas, Joseph M. Reinhardt
Guest Editorial: Medical Imaging Informatics - an Information Processing from Image Formation to Visualization. Int. J. Image Graph. 7 (1) (2007)
Milan Sonka, Juerg Tschirren, Soumik Ukil, X. Zhang, Ye Xu, Joseph M. Reinhardt, Edwin J. R. van Beek, Geoffrey McLennan, Eric A. Hoffman
Pulmonary CT Image Analysis and Computer Aided Detection. ISBI (2007)
Joseph M. Reinhardt, Gary E. Christensen, Eric A. Hoffman, Kai Ding, Kunlin Cao
Registration-Derived Estimates of Local Lung Expansion as Surrogates for Regional Ventilation. IPMI (2007)
Jessica de Ryk, Jacqueline Thiesse, Joseph M. Reinhardt, Eric A. Hoffman, Geoffrey McLennan
Establishing multi-modality datasets with the incorporation of 3D histopathology for soft tissue classification. Medical Imaging: Image Processing (2006)
Soumik Ukil, Milan Sonka, Joseph M. Reinhardt
Automatic segmentation of pulmonary fissures in x-ray CT images using anatomic guidance. Medical Imaging: Image Processing (2006)
Li Zhang, Eric A. Hoffman, Joseph M. Reinhardt
Atlas-driven lung lobe segmentation in volumetric X-ray CT images. IEEE Trans. Medical Imaging 25 (1) (2006)
Melissa J. Suter, Joseph M. Reinhardt, Eric A. Hoffman, Geoffrey McLennan
3D pulmonary airway color image reconstruction via shape from shading and virtual bronchoscopy imaging techniques. Medical Imaging: Image Processing (2005)
Zvi Markowitz, Murray H. Loew, Joseph M. Reinhardt
The use and benefit of stereology in choosing a CT scanning protocol for the lung. Medical Imaging: Image Processing (2005)
Soumik Ukil, Eric A. Hoffman, Joseph M. Reinhardt
Automatic lung lobe segmentation in x-ray CT images by 3D watershed transform using anatomic information from the segmented airway tree. Medical Imaging: Image Processing (2005)
Soumik Ukil, Joseph M. Reinhardt
Smoothing lung segmentation surfaces in 3D x-ray CT images using anatomic guidance. Medical Imaging: Image Processing (2004)
Smita Krishnan, Kenneth Beck, Joseph M. Reinhardt, Katherine Carlson, Eric A. Hoffman, Brett Simon, Richard Albert
Regional Lung Ventilation from Volumetric CT Scans Using Image Warping Functions. ISBI (2004)
Lina Arbach, Alan Stolpen, Joseph M. Reinhardt
Classification of Breast MRI Lesions Using A Backpropagation Neural Network (BNN). ISBI (2004)
Deniz Aykac, Eric A. Hoffman, Geoffrey McLennan, Joseph M. Reinhardt
Segmentation and Analysis of the Human Airway Tree from 3D X-ray CT Images. IEEE Trans. Medical Imaging 22 (8) (2003)
Lina Arbach, Darus L. Bennett, Joseph M. Reinhardt, Ghassan Fallouh
Classification of mammographic masses: comparison between Backpropagation Neural Network (BNN) and human readers. Medical Imaging: Image Processing (2003)
Juerg Tschirren, Kálmán Palágyi, Joseph M. Reinhardt, Eric A. Hoffman, Milan Sonka
Segmentation, Skeletonization, and Branchpoint Matching - A Fully Automated Quantitative Evaluation of Human Intrathoracic Airway Trees. MICCAI (2) (2002)
Hiroko Kitaoka, Yongsup Park, Juerg Tschirren, Joseph M. Reinhardt, Milan Sonka, Geoffrey McLennan, Eric A. Hoffman
Automated Nomenclature Labeling of the Bronchial Tree in 3D-CT Lung Images. MICCAI (2) (2002)
Junfeng Guo, Joseph M. Reinhardt, Hiroko Kitaoka, Li Zhang, Milan Sonka, Geoffrey McLennan, Eric A. Hoffman
Integrated system for CT-based assessment of parenchymal lung disease. ISBI (2002)
Shiying Hu, Eric A. Hoffman, Joseph M. Reinhardt
Automatic Lung Segmentation for Accurate Quantitation of Volumetric X-ray CT Images. IEEE Trans. Medical Imaging 20 (6) (2001)
Joseph M. Reinhardt, Junfeng Guo, Li Zhang, D. Bilgen, Shiying Hu, R. Uppaluri, Ryan M. Long, O. I. Saba, Geoffrey McLennan, Milan Sonka, Eric A. Hoffman
Integrated System for Objective Assessment of Global and Regional Lung Structure. MICCAI (2001)
Baojun Li, Joseph M. Reinhardt
Automatic generation of object shape models and their application to tomographic image segmentation. Medical Imaging: Image Processing (2001)
Joseph M. Reinhardt, Andrien J. Wang, Thomas P. Weldon, William E. Higgins
Cue-Based Segmentation of 4D Cardiac Image Sequences. Comput. Vis. Image Underst. 77 (2) (2000)
Joseph M. Reinhardt, N. D. D'Souza, Eric A. Hoffman
Accurate Measurement of Intrathoracic Airways. IEEE Trans. Medical Imaging 16 (6) (1997)
Joseph M. Reinhardt, William E. Higgins
Comparison Between the Morphological Skeleton and Morphological Shape Decomposition. IEEE Trans. Pattern Anal. Mach. Intell. 18 (9) (1996)
Joseph M. Reinhardt, William E. Higgins
Efficient morphological shape representation. IEEE Trans. Image Process. 5 (1) (1996)
Joseph M. Reinhardt, William E. Higgins
Strategy for shape-based image analysis. ICIP (1995)
William E. Higgins, Joseph M. Reinhardt, Werner L. Sharp
Semiautomatic construction of 3D medical image-segmentation processes. VBC (1994)
Joseph M. Reinhardt, William E. Higgins
Shape Representation: Comparison between the Morphological Skeleton and Morphological Shape Decomposition. ICIP (2) (1994)
Joseph M. Reinhardt, William E. Higgins
Automatic Generation of Image-Segmentation Processes. ICIP (3) (1994)
Joseph M. Reinhardt, William E. Higgins
Flexible search-based approach for morphological shape decomposition. VCIP (1993)
Joseph M. Reinhardt, William E. Higgins
Toward efficient morphological shape representation. ICASSP (5) (1993)