John W. Pinney

Publication Activity (10 Years)

Years Active: 2006-2015
Publications (10 Years): 0

Top Topics

Small World And Scale Free

Mathematical Modeling

Topological Properties

Top Venues

J. Comput. Biol.

Publications

Rodrigo Liberal, Beata K. Lisowska, David J. Leak, John W. Pinney
PathwayBooster: a tool to support the curation of metabolic pathways. BMC Bioinform. 16 (2015)
William A. Bryant, Ali A. Faruqi, John W. Pinney
Analysis of Metabolic Evolution in Bacteria Using Whole-Genome Metabolic Models. J. Comput. Biol. 20 (10) (2013)
William A. Bryant, Michael J. E. Sternberg, John W. Pinney
AMBIENT: Active Modules for Bipartite Networks - using high-throughput transcriptomic data to dissect metabolic response. BMC Syst. Biol. 7 (2013)
Rodrigo Liberal, John W. Pinney
Simple topological properties predict functional misannotations in a metabolic network. Bioinform. 29 (13) (2013)
Ali A. Faruqi, William A. Bryant, John W. Pinney
Analysis of Metabolic Evolution in Bacteria Using Whole-Genome Metabolic Models. RECOMB (2013)
Alain Coletta, John W. Pinney, David Y. Weiss Solís, James Marsh, Steve Pettifer, Teresa K. Attwood
Low-complexity regions within protein sequences have position-dependent roles. BMC Syst. Biol. 4 (2010)
Jamie I. MacPherson, Jonathan E. Dickerson, John W. Pinney, David L. Robertson
Patterns of HIV-1 Protein Interaction Identify Perturbed Host-Cellular Subsystems. PLoS Comput. Biol. 6 (7) (2010)
Jonathan E. Dickerson, John W. Pinney, David L. Robertson
The biological context of HIV-1 host interactions reveals subtle insights into a system hijack. BMC Syst. Biol. 4 (2010)
Jamie I. MacPherson, John W. Pinney, David L. Robertson
JNets: Exploring networks by integrating annotation. BMC Bioinform. 10 (2009)
John P. Archer, John W. Pinney, Jun Fan, Etienne Simon-Loriere, Eric J. Arts, Matteo Negroni, David L. Robertson
Identifying the Important HIV-1 Recombination Breakpoints. PLoS Comput. Biol. 4 (9) (2008)
James M. Eales, John W. Pinney, Robert D. Stevens, David L. Robertson
Methodology capture: discriminating between the "best" and the rest of community practice. BMC Bioinform. 9 (2008)
John W. Pinney, John M. Starkovich, Peter Li, David L. Robertson
SHARKview: a tool for the visualization of systems biology data. BMC Syst. Biol. 1 (S-1) (2007)
Brian J. Holden, John W. Pinney, Simon C. Lovell, Grigoris D. Amoutzias, David L. Robertson
An exploration of alternative visualisations of the basic helix-loop-helix protein interaction network. BMC Bioinform. 8 (2007)
Christopher Hyland, John W. Pinney, Glenn A. McConkey, David R. Westhead
metaSHARK: a WWW platform for interactive exploration of metabolic networks. Nucleic Acids Res. 34 (Web-Server-Issue) (2006)
Iain W. Manfield, Chih-Hung Jen, John W. Pinney, Ioannis Michalopoulos, James R. Bradford, Philip M. Gilmartin, David R. Westhead
Co-expression Tool (ACT): web server tools for microarray-based gene expression analysis. Nucleic Acids Res. 34 (Web-Server-Issue) (2006)