John P. Archer

Publication Activity (10 Years)

Years Active: 2007-2021
Publications (10 Years): 1

Top Topics

Graph Structure

Top Venues

PLoS Comput. Biol.

Publications

Raquel Linheiro, John P. Archer
CStone: A de novo transcriptome assembler for short-read data that identifies non-chimeric contigs based on underlying graph structure. PLoS Comput. Biol. 17 (11) (2021)
John P. Archer, Gareth Whiteley, Nicholas R. Casewell, Robert A. Harrison, Simon C. Wagstaff
VTBuilder: a tool for the assembly of multi isoform transcriptomes. BMC Bioinform. 15 (2014)
John P. Archer, Greg Baillie, Simon J. Watson, Paul Kellam, Andrew Rambaut, David L. Robertson
Analysis of high-depth sequence data for studying viral diversity: a comparison of next generation sequencing platforms using Segminator II. BMC Bioinform. 13 (2012)
John P. Archer, Andrew Rambaut, Bruce E. Taillon, P. Richard Harrigan, Marilyn Lewis, David L. Robertson
The Evolutionary Analysis of Emerging Low Frequency HIV-1 CXCR4 Using Variants through Time - An Ultra-Deep Approach. PLoS Comput. Biol. 6 (12) (2010)
John P. Archer, John W. Pinney, Jun Fan, Etienne Simon-Loriere, Eric J. Arts, Matteo Negroni, David L. Robertson
Identifying the Important HIV-1 Recombination Breakpoints. PLoS Comput. Biol. 4 (9) (2008)
John P. Archer, David L. Robertson
: comparison of clusters between phylogenetic trees made easy. Bioinform. 23 (21) (2007)