Jing Yuan

Publication Activity (10 Years)

Years Active: 2010-2024
Publications (10 Years): 33

Top Topics

Deformable Registration

Convex Optimization

Ultrasound Images

Top Venues

Medical Image Anal.

IEEE Trans. Medical Imaging

Medical Imaging: Image Processing

Publications

Kang Chen, Dexing Kong, Jing Yuan, Yili Hu, Jianping Li, Jijie Ma, Jianming Wen
Asymmetric-Backed Multi-Frequency Ultrasonic Transducer for Conformal Tumor Ablation. IEEE Trans. Biomed. Eng. 71 (8) (2024)
Xinyi Li, Jing Yuan, Xue-Cheng Tai, Sanyang Liu
Efficient Convex Optimization for Non-convex Non-smooth Image Restoration. J. Sci. Comput. 99 (2) (2024)
Hoel Kervadec, Jose Dolz, Jing Yuan, Christian Desrosiers, Eric Granger, Ismail Ben Ayed
Constrained deep networks: Lagrangian optimization via Log-barrier extensions. EUSIPCO (2022)
Jose Dolz, Christian Desrosiers, Li Wang, Jing Yuan, Dinggang Shen, Ismail Ben Ayed
Deep CNN ensembles and suggestive annotations for infant brain MRI segmentation. Comput. Medical Imaging Graph. 79 (2020)
Jose Dolz, Karthik Gopinath, Jing Yuan, Herve Lombaert, Christian Desrosiers, Ismail Ben Ayed
HyperDense-Net: A Hyper-Densely Connected CNN for Multi-Modal Image Segmentation. IEEE Trans. Medical Imaging 38 (5) (2019)
Jose Dolz, Ismail Ben Ayed, Jing Yuan, Christian Desrosiers
Isointense infant brain segmentation with a hyper-dense connected convolutional neural network. ISBI (2018)
Yi-Guang Bai, Sanyang Liu, Ke Yin, Jing Yuan
Variational Community Partition with Novel Network Structure Centrality Prior. CoRR (2018)
Jose Dolz, Karthik Gopinath, Jing Yuan, Herve Lombaert, Christian Desrosiers, Ismail Ben Ayed
HyperDense-Net: A hyper-densely connected CNN for multi-modal image segmentation. CoRR (2018)
Jing Yuan, Aaron Fenster
Modern Convex Optimization to Medical Image Analysis. CoRR (2018)
Wu Qiu, Yimin Chen, Jessica Kishimoto, Sandrine de Ribaupierre, Bernard Chiu, Aaron Fenster, Bijoy K. Menon, Jing Yuan
Longitudinal Analysis of Pre-Term Neonatal Cerebral Ventricles From 3D Ultrasound Images Using Spatial-Temporal Deformable Registration. IEEE Trans. Medical Imaging 36 (4) (2017)
Jing Yuan, Ke Yin, Yi-Guang Bai, Xiang-Chu Feng, Xue-Cheng Tai
Bregman-Proximal Augmented Lagrangian Approach to Multiphase Image Segmentation. SSVM (2017)
Jose Dolz, Christian Desrosiers, Li Wang, Jing Yuan, Dinggang Shen, Ismail Ben Ayed
Deep CNN ensembles and suggestive annotations for infant brain MRI segmentation. CoRR (2017)
Jose Dolz, Ismail Ben Ayed, Jing Yuan, Christian Desrosiers
HyperDense-Net: A hyper-densely connected CNN for multi-modal image semantic segmentation. CoRR (2017)
John S. H. Baxter, Martin Rajchl, A. Jonathan McLeod, Jing Yuan, Terry M. Peters
Directed Acyclic Graph Continuous Max-Flow Image Segmentation for Unconstrained Label Orderings. Int. J. Comput. Vis. 123 (3) (2017)
Wu Qiu, Yimin Chen, Jessica Kishimoto, Sandrine de Ribaupierre, Bernard Chiu, Aaron Fenster, Jing Yuan
Automatic segmentation approach to extracting neonatal cerebral ventricles from 3D ultrasound images. Medical Image Anal. 35 (2017)
Tharindu De Silva, Derek W. Cool, Jing Yuan, Cesare Romagnoli, Jagath Samarabandu, Aaron Fenster, Aaron D. Ward
Robust 2-D-3-D Registration Optimization for Motion Compensation During 3-D TRUS-Guided Biopsy Using Learned Prostate Motion Data. IEEE Trans. Medical Imaging 36 (10) (2017)
Jieyu Cheng, Wu Qiu, Jing Yuan, Aaron Fenster, Bernard Chiu
Accurate quantification of local changes for carotid arteries in 3D ultrasound images using convex optimization-based deformable registration. Medical Imaging: Image Processing (2016)
Martin Rajchl, John S. H. Baxter, A. Jonathan McLeod, Jing Yuan, Wu Qiu, Terry M. Peters, Ali R. Khan
Hierarchical max-flow segmentation framework for multi-atlas segmentation with Kohonen self-organizing map based Gaussian mixture modeling. Medical Image Anal. 27 (2016)
Martin Rajchl, John S. H. Baxter, Wu Qiu, Ali R. Khan, Aaron Fenster, Terry M. Peters, Daniel Rueckert, Jing Yuan
Fast Deformable Image Registration with Non-smooth Dual Optimization. CVPR Workshops (2016)
Wu Qiu, Jing Yuan, Aaron Fenster
3D prostate MR-TRUS non-rigid registration using dual optimization with volume-preserving constraint. Medical Imaging: Image Processing (2016)
Eranga Ukwatta, Hermenegild Arevalo, Kristina Li, Jing Yuan, Wu Qiu, Peter Malamas, Katherine C. Wu, Natalia A. Trayanova, Fijoy Vadakkumpadan
Myocardial Infarct Segmentation From Magnetic Resonance Images for Personalized Modeling of Cardiac Electrophysiology. IEEE Trans. Medical Imaging 35 (6) (2016)
John S. H. Baxter, Jing Yuan, Maria Drangova, Terry M. Peters, Jiro Inoue
Shape complexes in continuous max-flow segmentation. Medical Imaging: Image Processing (2016)
Wu Qiu, Jing Yuan, Martin Rajchl, Jessica Kishimoto, Yimin Chen, Sandrine de Ribaupierre, Bernard Chiu, Aaron Fenster
3D MR ventricle segmentation in pre-term infants with post-hemorrhagic ventricle dilatation (PHVD) using multi-phase geodesic level-sets. NeuroImage 118 (2015)
Wu Qiu, Jing Yuan, Jessica Kishimoto, Yimin Chen, Sandrine de Ribaupierre, Bernard Chiu, Aaron Fenster
3D MR ventricle segmentation in pre-term infants with post-hemorrhagic ventricle dilation. Medical Imaging: Image Processing (2015)
Caroline Petitjean, Maria A. Zuluaga, Wenjia Bai, Jean-Nicolas Dacher, Damien Grosgeorge, Jérôme Caudron, Su Ruan, Ismail Ben Ayed, Manuel Jorge Cardoso, Hsiang-Chou Chen, Daniel Jimenez-Carretero, María J. Ledesma-Carbayo, Christos Davatzikos, Jimit Doshi, Güray Erus, Oskar M. O. Maier, Cyrus M. S. Nambakhsh, Yangming Ou, Sébastien Ourselin, Chun-Wei Peng, Nicholas S. Peters, Terry M. Peters, Martin Rajchl, Daniel Rueckert, Andrés Santos, Wenzhe Shi, Ching-Wei Wang, Haiyan Wang, Jing Yuan
Right ventricle segmentation from cardiac MRI: A collation study. Medical Image Anal. 19 (1) (2015)
John S. H. Baxter, Jing Yuan, Terry M. Peters
Shape Complexes in Continuous Max-Flow Hierarchical Multi-Labeling Problems. CoRR (2015)
Yue Sun, Jing Yuan, Wu Qiu, Martin Rajchl, Cesare Romagnoli, Aaron Fenster
Three-Dimensional Nonrigid MR-TRUS Registration Using Dual Optimization. IEEE Trans. Medical Imaging 34 (5) (2015)
Eranga Ukwatta, Jing Yuan, Wu Qiu, Martin Rajchl, Bernard Chiu, Aaron Fenster
Joint segmentation of lumen and outer wall from femoral artery MR images: Towards 3D imaging measurements of peripheral arterial disease. Medical Image Anal. 26 (1) (2015)
Fumin Guo, Sarah Svenningsen, Emma Bluemke, Martin Rajchl, Jing Yuan, Aaron Fenster, Grace Parraga
Automated pulmonary lobar ventilation measurements using volume-matched thoracic CT and MRI. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging (2015)
Wu Qiu, Jing Yuan, Jessica Kishimoto, Yimin Chen, Martin Rajchl, Eranga Ukwatta, Sandrine de Ribaupierre, Aaron Fenster
Automatic 3D US Brain Ventricle Segmentation in Pre-Term Neonates Using Multi-phase Geodesic Level-Sets with Shape Prior. MICCAI (3) (2015)
Fumin Guo, Jing Yuan, Martin Rajchl, Sarah Svenningsen, Dante P. I. Capaldi, Khadija Sheikh, Aaron Fenster, Grace Parraga
He MRI with spatial consistence prior. Medical Image Anal. 23 (1) (2015)
John S. H. Baxter, Martin Rajchl, Jing Yuan, Terry M. Peters
A Proximal Bregman Projection Approach to Continuous Max-Flow Problems Using Entropic Distances. CoRR (2015)
Wu Qiu, Jing Yuan, Jessica Kishimoto, Yimin Chen, Martin Rajchl, Eranga Ukwatta, Sandrine de Ribaupierre, Aaron Fenster
Longitudinal Analysis of Pre-term Neonatal Brain Ventricle in Ultrasound Images Based on Convex Optimization. MICCAI (3) (2015)
Geert Litjens, Robert Toth, Wendy J. M. van de Ven, Caroline Hoeks, Sjoerd Kerkstra, Bram van Ginneken, Graham Vincent, Gwenaël Guillard, Neil Birbeck, Jindang Zhang, Robin Strand, Filip Malmberg, Yangming Ou, Christos Davatzikos, Matthias Kirschner, Florian Jung, Jing Yuan, Wu Qiu, Qinquan Gao, Philip J. Edwards, Bianca Maan, Ferdinand van der Heijden, Soumya Ghose, Jhimli Mitra, Jason Dowling, Dean C. Barratt, Henkjan J. Huisman, Anant Madabhushi
Evaluation of prostate segmentation algorithms for MRI: The PROMISE12 challenge. Medical Image Anal. 18 (2) (2014)
Eranga Ukwatta, Jing Yuan, Wu Qiu, Katherine C. Wu, Natalia A. Trayanova, Fijoy Vadakkumpadan
Myocardial Infarct Segmentation and Reconstruction from 2D Late-Gadolinium Enhanced Magnetic Resonance Images. MICCAI (2) (2014)
John S. H. Baxter, Martin Rajchl, Jing Yuan, Terry M. Peters
A Continuous Max-Flow Approach to Multi-Labeling Problems under Arbitrary Region Regularization. CoRR (2014)
Wu Qiu, Jing Yuan, Eranga Ukwatta, Yue Sun, Martin Rajchl, Aaron Fenster
Dual optimization based prostate zonal segmentation in 3D MR images. Medical Image Anal. 18 (4) (2014)
Wu Qiu, Jing Yuan, Jessica Kishimoto, Sandrine de Ribaupierre, Eranga Ukwatta, Aaron Fenster
Semi-automatic segmentation of preterm neonate ventricle system from 3D ultrasound images. ISBI (2014)
Wu Qiu, Jing Yuan, Martin Rajchl, Jessica Kishimoto, Eranga Ukwatta, Sandrine de Ribaupierre, Aaron Fenster
Cerebral Ventricle Segmentation from 3D Pre-term IVH Neonate MR Images Using Atlas-Based Convex Optimization. CARE@MICCAI (2014)
Wu Qiu, Martin Rajchl, Fumin Guo, Yue Sun, Eranga Ukwatta, Aaron Fenster, Jing Yuan
3D Prostate TRUS Segmentation Using Globally Optimized Volume-Preserving Prior. MICCAI (1) (2014)
John S. H. Baxter, Martin Rajchl, A. Jonathan McLeod, Ali R. Khan, Jing Yuan, Terry M. Peters
Smoothness parameter tuning for generalized hierarchical continuous max-flow segmentation. Medical Imaging: Image Processing (2014)
John S. H. Baxter, Martin Rajchl, Jing Yuan, Terry M. Peters
A Continuous Max-Flow Approach to General Hierarchical Multi-Labelling Problems. CoRR (2014)
Jing Yuan, Egil Bae, Xue-Cheng Tai, Yuri Boykov
A spatially continuous max-flow and min-cut framework for binary labeling problems. Numerische Mathematik 126 (3) (2014)
Martin Rajchl, John S. H. Baxter, Wu Qiu, Ali R. Khan, Aaron Fenster, Terry M. Peters, Jing Yuan
RANCOR: Non-Linear Image Registration with Total Variation Regularization. CoRR (2014)
Wu Qiu, Jing Yuan, Eranga Ukwatta, Yue Sun, Martin Rajchl, Aaron Fenster
Prostate Segmentation: An Efficient Convex Optimization Approach With Axial Symmetry Using 3-D TRUS and MR Images. IEEE Trans. Medical Imaging 33 (4) (2014)
Martin Rajchl, Jing Yuan, James A. White, Eranga Ukwatta, John Stirrat, Cyrus M. S. Nambakhsh, Feng P. Li, Terry M. Peters
Interactive Hierarchical-Flow Segmentation of Scar Tissue From Late-Enhancement Cardiac MR Images. IEEE Trans. Medical Imaging 33 (1) (2014)
Martin Rajchl, John S. H. Baxter, Egil Bae, Xue-Cheng Tai, Aaron Fenster, Terry M. Peters, Jing Yuan
Variational Time-Implicit Multiphase Level-Sets - A Fast Convex Optimization-Based Solution. EMMCVPR (2014)
Mohamed Ben Salah, Ismail Ben Ayed, Jing Yuan, Hong Zhang
Convex-Relaxed Kernel Mapping for Image Segmentation. IEEE Trans. Image Process. 23 (3) (2014)
Egil Bae, Xue-Cheng Tai, Jing Yuan
Maximizing Flows with Message-Passing: Computing Spatially Continuous Min-Cuts. EMMCVPR (2014)
Eranga Ukwatta, Jing Yuan, Wu Qiu, Martin Rajchl, Aaron Fenster
Efficient convex optimization-based curvature dependent contour evolution approach for medical image segmentation. Medical Imaging: Image Processing (2013)
Eranga Ukwatta, Jing Yuan, Martin Rajchl, Wu Qiu, David Tessier, Aaron Fenster
3-D Carotid Multi-Region MRI Segmentation by Globally Optimal Evolution of Coupled Surfaces. IEEE Trans. Medical Imaging 32 (4) (2013)
Wu Qiu, Jing Yuan, Eranga Ukwatta, Yue Sun, Martin Rajchl, Aaron Fenster
Fast Globally Optimal Segmentation of 3D Prostate MRI with Axial Symmetry Prior. MICCAI (2) (2013)
Eranga Ukwatta, Jing Yuan, Wu Qiu, Martin Rajchl, Bernard Chiu, Shadi Shavakh, Jianrong Xu, Aaron Fenster
Joint Segmentation of 3D Femoral Lumen and Outer Wall Surfaces from MR Images. MICCAI (1) (2013)
Wu Qiu, Jing Yuan, Eranga Ukwatta, David Tessier, Aaron Fenster
Prostate segmentation in 3D TRUS using convex optimization with shape constraint. Medical Imaging: Image Processing (2013)
Tharindu De Silva, Derek W. Cool, Jing Yuan, Cesare Romagnoli, Aaron Fenster, Aaron D. Ward
Improving 2D-3D Registration Optimization Using Learned Prostate Motion Data. MICCAI (2) (2013)
Wu Qiu, Jing Yuan, Jessica Kishimoto, Eranga Ukwatta, Aaron Fenster
Lateral Ventricle Segmentation of 3D Pre-term Neonates US Using Convex Optimization. MICCAI (3) (2013)
Yue Sun, Jing Yuan, Martin Rajchl, Wu Qiu, Cesare Romagnoli, Aaron Fenster
Efficient Convex Optimization Approach to 3D Non-rigid MR-TRUS Registration. MICCAI (1) (2013)
Jing Yuan, Wu Qiu, Martin Rajchl, Eranga Ukwatta, Xue-Cheng Tai, Aaron Fenster
Efficient 3D Endfiring TRUS Prostate Segmentation with Globally Optimized Rotational Symmetry. CVPR (2013)
Jing Yuan, Eranga Ukwatta, Wu Qiu, Martin Rajchl, Yue Sun, Xue-Cheng Tai, Aaron Fenster
Jointly Segmenting Prostate Zones in 3D MRIs by Globally Optimized Coupled Level-Sets. EMMCVPR (2013)
Wu Qiu, Jing Yuan, Eranga Ukwatta, Yue Sun, Martin Rajchl, Aaron Fenster
Efficient 3D Multi-region Prostate MRI Segmentation Using Dual Optimization. IPMI (2013)
Cyrus M. S. Nambakhsh, Jing Yuan, Kumaradevan Punithakumar, Aashish Goela, Martin Rajchl, Terry M. Peters, Ismail Ben Ayed
Left ventricle segmentation in MRI via convex relaxed distribution matching. Medical Image Anal. 17 (8) (2013)
Martin Rajchl, Jing Yuan, Eranga Ukwatta, Terry M. Peters
Fast interactive multi-region cardiac segmentation with linearly ordered labels. ISBI (2012)
Martin Rajchl, Jing Yuan, Terry M. Peters
Real-time segmentation in 4D ultrasound with continuous max-flow. Medical Imaging: Image Processing (2012)
Martin Rajchl, Jing Yuan, James A. White, Cyrus M. S. Nambakhsh, Eranga Ukwatta, Feng Li, John Stirrat, Terry M. Peters
A Fast Convex Optimization Approach to Segmenting 3D Scar Tissue from Delayed-Enhancement Cardiac MR Images. MICCAI (1) (2012)
Wu Qiu, Jing Yuan, Eranga Ukwatta, David Tessier, Aaron Fenster
Rotational-Slice-Based Prostate Segmentation Using Level Set with Shape Constraint for 3D End-Firing TRUS Guided Biopsy. MICCAI (1) (2012)
Abraam S. Soliman, Jing Yuan, James A. White, Terry M. Peters, Charles A. McKenzie
A Convex Relaxation Approach to Fat/Water Separation with Minimum Label Description. MICCAI (2) (2012)
Eranga Ukwatta, Jing Yuan, Martin Rajchl, Aaron Fenster
Efficient Global Optimization Based 3D Carotid AB-LIB MRI Segmentation by Simultaneously Evolving Coupled Surfaces. MICCAI (3) (2012)
Kumaradevan Punithakumar, Jing Yuan, Ismail Ben Ayed, Shuo Li, Yuri Boykov
A Convex Max-Flow Approach to Distribution-Based Figure-Ground Separation. SIAM J. Imaging Sci. 5 (4) (2012)
Egil Bae, Jing Yuan, Xue-Cheng Tai, Yuri Boykov
A Fast Continuous Max-Flow Approach to Non-convex Multi-labeling Problems. Efficient Algorithms for Global Optimization Methods in Computer Vision (2011)
Egil Bae, Jing Yuan, Xue-Cheng Tai
Global Minimization for Continuous Multiphase Partitioning Problems Using a Dual Approach. Int. J. Comput. Vis. 92 (1) (2011)
Jing Yuan, Egil Bae, Yuri Boykov, Xue-Cheng Tai
A Continuous Max-Flow Approach to Minimal Partitions with Label Cost Prior. SSVM (2011)
Jing Yuan, Juan Shi, Xue-Cheng Tai, Yuri Boykov
A Study on Convex Optimization Approaches to Image Fusion. SSVM (2011)
Mohammad Saleh Nambakhsh, Jing Yuan, Ismail Ben Ayed, Kumaradevan Punithakumar, Aashish Goela, Ali Islam, Terry M. Peters, Shuo Li
A Convex Max-Flow Segmentation of LV Using Subject-Specific Distributions on Cardiac MRI. IPMI (2011)
Jing Yuan, Egil Bae, Xue-Cheng Tai
A study on continuous max-flow and min-cut approaches. CVPR (2010)
Jing Yuan, Egil Bae, Xue-Cheng Tai, Yuri Boykov
A Continuous Max-Flow Approach to Potts Model. ECCV (6) (2010)