Javier Sancho

Publication Activity (10 Years)

Years Active: 2004-2023
Publications (10 Years): 5

Top Topics

Accurate Models

Molecular Dynamics

Special Purpose

Top Venues

Briefings Bioinform.

J. Chem. Inf. Model.

Comput. Phys. Commun.

Publications

Lorién López-Villellas, Carl Christian Kjelgaard Mikkelsen, Juan José Galano-Frutos, Santiago Marco-Sola, Jesús Alastruey-Benedé, Pablo Ibáñez, Miquel Moretó, Javier Sancho, Pablo García-Risueño
Accurate and efficient constrained molecular dynamics of polymers using Newton's method and special purpose code. Comput. Phys. Commun. 288 (2023)
Juan José Galano-Frutos, Francho Nerín-Fonz, Javier Sancho
Calculation of Protein Folding Thermodynamics Using Molecular Dynamics Simulations. J. Chem. Inf. Model. 63 (24) (2023)
Juan José Galano-Frutos, Helena García-Cebollada, Javier Sancho
Erratum to: Molecular dynamics simulations for genetic interpretation in protein coding regions: where we are, where to go and when. Briefings Bioinform. 22 (1) (2021)
Juan José Galano-Frutos, Helena García-Cebollada, Javier Sancho
Molecular dynamics simulations for genetic interpretation in protein coding regions: where we are, where to go and when. Briefings Bioinform. 22 (1) (2021)
Juan José Galano-Frutos, Javier Sancho
Accurate Calculation of Barnase and SNase Folding Energetics Using Short Molecular Dynamics Simulations and an Atomistic Model of the Unfolded Ensemble: Evaluation of Force Fields and Water Models. J. Chem. Inf. Model. 59 (10) (2019)
Rebeca García-Fandiño, Pau Bernadó, Sara Ayuso-Tejedor, Javier Sancho, Modesto Orozco
Defining the Nature of Thermal Intermediate in 3 State Folding Proteins: Apoflavodoxin, a Study Case. PLoS Comput. Biol. 8 (8) (2012)
Jorge Estrada, Pau Bernadó, Martin Blackledge, Javier Sancho
ProtSA: a web application for calculating sequence specific protein solvent accessibilities in the unfolded ensemble. BMC Bioinform. 10 (2009)
Rubén Gil-Redondo, Jorge Estrada, Antonio Morreale, Fernando Herranz, Javier Sancho, Angel R. Ortiz
VSDMIP: virtual screening data management on an integrated platform. J. Comput. Aided Mol. Des. 23 (3) (2009)
Claudia Machicado, Jon López-Llano, Santiago Cuesta-López, Marta Bueno, Javier Sancho
Design of Ligand Binding to an Engineered Protein Cavity Using Virtual Screening and Thermal Up-shift Evaluation. J. Comput. Aided Mol. Des. 19 (6) (2005)
Marta Bueno, Jesus Tejero, Javier Sancho
The Long and Short Flavodoxins: Evolutionary Origin and Role of the Differentiating Loop in Apoflavodoxin Structure. Spanish Bioinformatics Conference (2004)
Jorge Estrada, Marta Bueno, Adrián Velázquez, Nunilo Cremades, Javier Sancho
Virtual Screening of Small Molecules Binding to an Engineered Protein Cavity in Flavodoxin using Freely Available Docking Software. Spanish Bioinformatics Conference (2004)
Marta Bueno, Carlos J. Camacho, Javier Sancho
What Works (and What Doesn't) in Estimating the Change in Free Energy due to Point Mutations in the Protein Interior. Spanish Bioinformatics Conference (2004)