Janez Konc

Publication Activity (10 Years)

Years Active: 2007-2022
Publications (10 Years): 13

Top Topics

Virtual Screening

Protein Protein

Top Venues

J. Chem. Inf. Model.

J. Cheminformatics

Nucleic Acids Res.

Publications

Blaz Skrlj, Jan Kralj, Janez Konc, Marko Robnik-Sikonja, Nada Lavrac
Deep node ranking for neuro-symbolic structural node embedding and classification. Int. J. Intell. Syst. 37 (1) (2022)
Janez Konc, Samo Lesnik, Blaz Skrlj, Matej Sova, Matic Proj, Damijan Knez, Stanislav Gobec, Dusanka Janezic
ProBiS-Dock: A Hybrid Multitemplate Homology Flexible Docking Algorithm Enabled by Protein Binding Site Comparison. J. Chem. Inf. Model. 62 (6) (2022)
Janez Konc, Dusanka Janezic
ProBiS-Fold Approach for Annotation of Human Structures from the AlphaFold Database with No Corresponding Structure in the PDB to Discover New Druggable Binding Sites. J. Chem. Inf. Model. 62 (22) (2022)
Blaz Skrlj, Nika Erzen, Nada Lavrac, Tanja Kunej, Janez Konc
CaNDis: a web server for investigation of causal relationships between diseases, drugs and drug targets. Bioinform. 37 (6) (2021)
Janez Konc, Samo Lesnik, Blaz Skrlj, Dusanka Janezic
ProBiS-Dock Database: A Web Server and Interactive Web Repository of Small Ligand-Protein Binding Sites for Drug Design. J. Chem. Inf. Model. 61 (8) (2021)
Samo Lesnik, Milan Hodoscek, Barbara Podobnik, Janez Konc
Loop Grafting between Similar Local Environments for Fc-Silent Antibodies. J. Chem. Inf. Model. 60 (11) (2020)
Jonathan Fine, Janez Konc, Ram Samudrala, Gaurav Chopra
CANDOCK: Chemical Atomic Network-Based Hierarchical Flexible Docking Algorithm Using Generalized Statistical Potentials. J. Chem. Inf. Model. 60 (3) (2020)
Blaz Skrlj, Jan Kralj, Janez Konc, Marko Robnik-Sikonja, Nada Lavrac
Deep Node Ranking: an Algorithm for Structural Network Embedding and End-to-End Classification. CoRR (2019)
Katarina Kores, Samo Lesnik, Urban Bren, Dusanka Janezic, Janez Konc
Discovery of Novel Potential Human Targets of Resveratrol by Inverse Molecular Docking. J. Chem. Inf. Model. 59 (5) (2019)
Samo Lesnik, Blaz Skrlj, Nika Erzen, Urban Bren, Stanislav Gobec, Janez Konc, Dusanka Janezic
BoBER: web interface to the base of bioisosterically exchangeable replacements. J. Cheminformatics 9 (1) (2017)
Janez Konc, Blaz Skrlj, Nika Erzen, Tanja Kunej, Dusanka Janezic
GenProBiS: web server for mapping of sequence variants to protein binding sites. Nucleic Acids Res. 45 (Webserver-Issue) (2017)
Marko Jukic, Janez Konc, Stanislav Gobec, Dusanka Janezic
Identification of Conserved Water Sites in Protein Structures for Drug Design. J. Chem. Inf. Model. 57 (12) (2017)
Athira Dilip, Samo Lesnik, Tanja Stular, Dusanka Janezic, Janez Konc
Ligand-based virtual screening interface between PyMOL and LiSiCA. J. Cheminformatics 8 (1) (2016)
Samo Lesnik, Tanja Stular, Boris Brus, Damijan Knez, Stanislav Gobec, Dusanka Janezic, Janez Konc
LiSiCA: A Software for Ligand-Based Virtual Screening and Its Application for the Discovery of Butyrylcholinesterase Inhibitors. J. Chem. Inf. Model. 55 (8) (2015)
Janez Konc, Samo Lesnik, Dusanka Janezic
Modeling enzyme-ligand binding in drug discovery. J. Cheminformatics 7 (2015)
Janez Konc, Benjamin T. Miller, Tanja Stular, Samo Lesnik, H. Lee Woodcock III, Bernard R. Brooks, Dusanka Janezic
ProBiS-CHARMMing: Web Interface for Prediction and Optimization of Ligands in Protein Binding Sites. J. Chem. Inf. Model. 55 (11) (2015)
Mitja Ogrizek, Samo Turk, Samo Lesnik, Izidor Sosic, Milan Hodoscek, Bojana Mirkovic, Janko Kos, Dusanka Janezic, Stanislav Gobec, Janez Konc
Molecular dynamics to enhance structure-based virtual screening on cathepsin B. J. Comput. Aided Mol. Des. 29 (8) (2015)
Janez Konc, Dusanka Janezic
ProBiS-ligands: a web server for prediction of ligands by examination of protein binding sites. Nucleic Acids Res. 42 (Webserver-Issue) (2014)
Janez Konc, Milan Hodoscek, Mitja Ogrizek, Joanna Trykowska Konc, Dusanka Janezic
Structure-Based Function Prediction of Uncharacterized Protein Using Binding Sites Comparison. PLoS Comput. Biol. 9 (11) (2013)
Matjaz Depolli, Janez Konc, Kati Rozman, Roman Trobec, Dusanka Janezic
Exact Parallel Maximum Clique Algorithm for General and Protein Graphs. J. Chem. Inf. Model. 53 (9) (2013)
Muhammad Yusuf, Janez Konc, Sy Bing Choi, Joanna Trykowska Konc, Nurul Bahiyah Ahmad Khairudin, Dusanka Janezic, Habibah A. Wahab
Structurally Conserved Binding Sites of Hemagglutinin as Targets for Influenza Drug and Vaccine Development. J. Chem. Inf. Model. 53 (9) (2013)
Janez Konc, Matjaz Depolli, Roman Trobec, Kati Rozman, Dusanka Janezic
Parallel-ProBiS: Fast parallel algorithm for local structural comparison of protein structures and binding sites. J. Comput. Chem. 33 (27) (2012)
Nejc Carl, Milan Hodoscek, Blaz Vehar, Janez Konc, Bernard R. Brooks, Dusanka Janezic
Correlating Protein Hot Spot Surface Analysis Using ProBiS with Simulated Free Energies of Protein-Protein Interfacial Residues. J. Chem. Inf. Model. 52 (10) (2012)
Janez Konc, Dusanka Janezic
ProBiS-2012: web server and web services for detection of structurally similar binding sites in proteins. Nucleic Acids Res. 40 (Web-Server-Issue) (2012)
Janez Konc, Tomo Cesnik, Joanna Trykowska Konc, Matej Penca, Dusanka Janezic
ProBiS-Database: Precalculated Binding Site Similarities and Local Pairwise Alignments of PDB Structures. J. Chem. Inf. Model. 52 (2) (2012)
Janez Konc, Dusanka Janezic
ProBiS: a web server for detection of structurally similar protein binding sites. Nucleic Acids Res. 38 (Web-Server-Issue) (2010)
Janez Konc, Dusanka Janezic
ProBiS algorithm for detection of structurally similar protein binding sites by local structural alignment. Bioinform. 26 (9) (2010)
Nejc Carl, Janez Konc, Blaz Vehar, Dusanka Janezic
Protein-Protein Binding Site Prediction by Local Structural Alignment. J. Chem. Inf. Model. 50 (10) (2010)
Nejc Carl, Janez Konc, Dusanka Janezic
Protein Surface Conservation in Binding Sites. J. Chem. Inf. Model. 48 (6) (2008)
Janez Konc, Dusanka Janezic
Protein-Protein Binding-Sites Prediction by Protein Surface Structure Conservation. J. Chem. Inf. Model. 47 (3) (2007)
Janez Konc, Dusanka Janezic
A Branch and Bound Algorithm for Matching Protein Structures. ICANNGA (2) (2007)