Jan Grau

Publication Activity (10 Years)

Years Active: 2005-2024
Publications (10 Years): 5

Top Topics

Motif Discovery

Precision And Recall

Top Venues

PLoS Comput. Biol.

CHI Extended Abstracts

Publications

Jan Grau, Simon Mayer, Jannis Strecker, Kimberly García, Kenan Bektas
Gaze-based Opportunistic Privacy-preserving Human-Agent Collaboration. CHI Extended Abstracts (2024)
Annett Erkes, Stefanie Mücke, Maik Reschke, Jens Boch, Jan Grau
PrediTALE: A novel model learned from quantitative data allows for new perspectives on TALE targeting. PLoS Comput. Biol. 15 (7) (2019)
Jan Grau, Martin Nettling, Jens Keilwagen
DepLogo: visualizing sequence dependencies in R. Bioinform. 35 (22) (2019)
Jens Keilwagen, Frank Hartung, Michael Paulini, Sven Twardziok, Jan Grau
Combining RNA-seq data and homology-based gene prediction for plants, animals and fungi. BMC Bioinform. 19 (1) (2018)
Ralf Eggeling, Ivo Grosse, Jan Grau
InMoDe: tools for learning and visualizing intra-motif dependencies of DNA binding sites. Bioinform. 33 (4) (2017)
Martin Nettling, Hendrik Treutler, Jan Grau, Jens Keilwagen, Stefan Posch, Ivo Grosse
DiffLogo: a comparative visualization of sequence motifs. BMC Bioinform. 16 (2015)
Jan Grau, Ivo Grosse, Jens Keilwagen
PRROC: computing and visualizing precision-recall and receiver operating characteristic curves in R. Bioinform. 31 (15) (2015)
Jan Grau, Stefan Posch, Ivo Grosse, Jens Keilwagen
A general approach for discriminative de novo motif discovery from high-throughput data. GCB (2014)
Jan Grau, Annett Wolf, Maik Reschke, Ulla Bonas, Stefan Posch, Jens Boch
Computational Predictions Provide Insights into the Biology of TAL Effector Target Sites. PLoS Comput. Biol. 9 (3) (2013)
Jan Grau, Jens Boch, Stefan Posch
TALENoffer: genome-wide TALEN off-target prediction. Bioinform. 29 (22) (2013)
Jan Grau, Jens Keilwagen, André Gohr, Ivan A. Paponov, Stefan Posch, Michael Seifert, Marc Strickert, Ivo Grosse
Dispom: a Discriminative de-novo Motif Discovery Tool Based on the Jstacs Library. J. Bioinform. Comput. Biol. 11 (1) (2013)
Jan Grau, Jens Keilwagen, André Gohr, Berit Haldemann, Stefan Posch, Ivo Grosse
Jstacs: A Java Framework for Statistical Analysis and Classification of Biological Sequences. J. Mach. Learn. Res. 13 (2012)
Jens Keilwagen, Jan Grau, Ivan A. Paponov, Stefan Posch, Marc Strickert, Ivo Grosse
De-Novo Discovery of Differentially Abundant Transcription Factor Binding Sites Including Their Positional Preference. PLoS Comput. Biol. 7 (2) (2011)
Jan Grau, Daniel Arend, Ivo Grosse, Artemis G. Hatzigeorgiou, Jens Keilwagen, Manolis Maragkakis, Claus Weinholdt, Stefan Posch
Predicting miRNA targets utilizing an Extended Profile HMM. GCB (2010)
Jens Keilwagen, Jan Grau, Stefan Posch, Marc Strickert, Ivo Grosse
Unifying generative and discriminative learning principles. BMC Bioinform. 11 (2010)
Jens Keilwagen, Jan Grau, Stefan Posch, Ivo Grosse
Apples and oranges: avoiding different priors in Bayesian DNA sequence analysis. BMC Bioinform. 11 (2010)
Stefan Posch, Jan Grau, André Gohr, Irad E. Ben-Gal, Alexander E. Kel, Ivo Grosse
Recognition of cis-Regulatory Elements with Vombat. J. Bioinform. Comput. Biol. 5 (2b) (2007)
Jens Keilwagen, Jan Grau, Stefan Posch, Ivo Grosse
Recognition of splice sites using maximum conditional likelihood. LWA (2007)
Jan Grau, Jens Keilwagen, Ivo Grosse, Stefan Posch
On the relevance of model orders to discriminative learning of Markov models. LWA (2007)
Jan Grau, Jens Keilwagen, Alexander E. Kel, Ivo Grosse, Stefan Posch
Supervised Posteriors for DNA-motif Classification. German Conference on Bioinformatics (2007)
Jan Grau, Irad E. Ben-Gal, Stefan Posch, Ivo Grosse
VOMBAT: prediction of transcription factor binding sites using variable order Bayesian trees. Nucleic Acids Res. 34 (Web-Server-Issue) (2006)
Irad E. Ben-Gal, Ayala Shani, André Gohr, Jan Grau, S. Arviv, Armin Shmilovici, Stefan Posch, Ivo Grosse
Identification of transcription factor binding sites with variable-order Bayesian networks. Bioinform. 21 (11) (2005)