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Jakob Ruess
ORCID
Publication Activity (10 Years)
Years Active: 2013-2022
Publications (10 Years): 7
Top Topics
Experimental Designs
Chemical Reaction
Finite State
Stochastic Simulation
Top Venues
PLoS Comput. Biol.
ECC
CMSB
CDC
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Publications
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Andela Davidovic
,
Remy Chait
,
Grégory Batt
,
Jakob Ruess
Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level.
PLoS Comput. Biol.
18 (3) (2022)
Davin Lunz
,
Grégory Batt
,
Jakob Ruess
,
J. Frédéric Bonnans
Beyond the chemical master equation: Stochastic chemical kinetics coupled with auxiliary processes.
PLoS Comput. Biol.
17 (7) (2021)
Maxim Kryukov
,
Arthur Carcano
,
Grégory Batt
,
Jakob Ruess
Can optimal experimental design serve as a tool to characterize highly non-linear synthetic circuits?
ECC
(2019)
Élise Weill
,
Virgile Andréani
,
Chetan Aditya
,
Pierre Martinon
,
Jakob Ruess
,
Grégory Batt
,
J. Frédéric Bonnans
Optimal control of an artificial microbial differentiation system for protein bioproduction.
ECC
(2019)
Sarah Anhala Cepeda-Humerez
,
Jakob Ruess
,
Gasper Tkacik
Estimating information in time-varying signals.
PLoS Comput. Biol.
15 (9) (2019)
Jakob Ruess
,
Maros Pleska
,
Calin C. Guet
,
Gasper Tkacik
Molecular noise of innate immunity shapes bacteria-phage ecologies.
PLoS Comput. Biol.
15 (7) (2019)
Christian Schilling
,
Sergiy Bogomolov
,
Thomas A. Henzinger
,
Andreas Podelski
,
Jakob Ruess
Adaptive moment closure for parameter inference of biochemical reaction networks.
Biosyst.
149 (2016)
Jakob Ruess
,
John Lygeros
Moment-Based Methods for Parameter Inference and Experiment Design for Stochastic Biochemical Reaction Networks.
ACM Trans. Model. Comput. Simul.
25 (2) (2015)
Sergiy Bogomolov
,
Thomas A. Henzinger
,
Andreas Podelski
,
Jakob Ruess
,
Christian Schilling
Adaptive Moment Closure for Parameter Inference of Biochemical Reaction Networks.
CMSB
(2015)
Francesca Parise
,
Jakob Ruess
,
John Lygeros
Grey-box techniques for the identification of a controlled gene expression model.
ECC
(2014)
Aron Hjartarson
,
Jakob Ruess
,
John Lygeros
Approximating the solution of the chemical master equation by combining finite state projection and stochastic simulation.
CDC
(2013)
Jakob Ruess
,
John Lygeros
On the Use of the Moment Equations for Parameter Inference, Control and Experimental Design in Stochastic Biochemical Reaction Networks.
CMSB
(2013)
Jakob Ruess
,
John Lygeros
Identifying stochastic biochemical networks from single-cell population experiments: A comparison of approaches based on the Fisher information.
CDC
(2013)