Jaebum Kim

Publication Activity (10 Years)

Years Active: 2002-2022
Publications (10 Years): 9

Top Topics

Interactive Visual

Web Based Information Systems

Sequence Alignment

Structural Similarity

Top Venues

Nucleic Acids Res.

Publications

Suyeon Wy, Daehong Kwon, Kisang Kwon, Jaebum Kim
DLEB: a web application for building deep learning models in biological research. Nucleic Acids Res. 50 (W1) (2022)
Heesun Kim, Mikang Sim, Na Young Park, Kisang Kwon, Junyoung Kim, Jaebum Kim
msPIPE: a pipeline for the analysis and visualization of whole-genome bisulfite sequencing data. BMC Bioinform. 23 (1) (2022)
Mikang Sim, Jongin Lee, Daehwan Lee, Daehong Kwon, Jaebum Kim
TAMA: improved metagenomic sequence classification through meta-analysis. BMC Bioinform. 21 (1) (2020)
Daehong Kwon, Jongin Lee, Jaebum Kim
GMASS: a novel measure for genome assembly structural similarity. BMC Bioinform. 20 (1) (2019)
Jongin Lee, Daehwan Lee, Mikang Sim, Daehong Kwon, Juyeon Kim, Younhee Ko, Jaebum Kim
mySyntenyPortal: an application package to construct websites for synteny block analysis. BMC Bioinform. 19 (1) (2018)
Daehong Kwon, Daehwan Lee, Juyeon Kim, Jongin Lee, Mikang Sim, Jaebum Kim
INTERSPIA: a web application for exploring the dynamics of protein-protein interactions among multiple species. Nucleic Acids Res. 46 (Webserver-Issue) (2018)
Chris Bryan, Gregory Guterman, Kwan-Liu Ma, Harris A. Lewin, Denis M. Larkin, Jaebum Kim, Jian Ma, Marta Farre
Synteny Explorer: An Interactive Visualization Application for Teaching Genome Evolution. IEEE Trans. Vis. Comput. Graph. 23 (1) (2017)
Juyeon Kim, Daehwan Lee, Mikang Sim, Jongin Lee, Jaebum Kim
The effect of reference species on reference-guided genome assembly. CSBio (2017)
Jongin Lee, Woonyoung Hong, Minah Cho, Mikang Sim, Daehwan Lee, Younhee Ko, Jaebum Kim
Synteny Portal: a web-based application portal for synteny block analysis. Nucleic Acids Res. 44 (Webserver-Issue) (2016)
Jaebum Kim, Jian Ma
PSAR-Align: improving multiple sequence alignment using probabilistic sampling. Bioinform. 30 (7) (2014)
Ho-Sik Seok, Woonyoung Hong, Jaebum Kim
Estimating the number of species in metagenomes by clustering next-generation read sequences. BigComp (2014)
Jaebum Kim, Denis M. Larkin, Qingle Cai, Asan, Yongfen Zhang, Ri-Li Ge, Loretta Auvil, Boris Capitanu, Guojie Zhang, Harris A. Lewin, Jian Ma
Reference-assisted chromosome assembly. Proc. Natl. Acad. Sci. USA 110 (5) (2013)
Jaebum Kim, Jian Ma
PSAR: Measuring Multiple Sequence Alignment Reliability by Probabilistic Sampling - (Extended Abstract). RECOMB (2011)
Jaebum Kim, Ryan Cunningham, Brian James, Stefan Wyder, Joshua D. Gibson, Oliver Niehuis, Evgeny M. Zdobnov, Hugh M. Robertson, Gene E. Robinson, John H. Werren, Saurabh Sinha
Functional Characterization of Transcription Factor Motifs Using Cross-species Comparison across Large Evolutionary Distances. PLoS Comput. Biol. 6 (1) (2010)
Jaebum Kim, Saurabh Sinha
Towards realistic benchmarks for multiple alignments of non-coding sequences. BMC Bioinform. 11 (2010)
Kyuho Shim, Young-Rae Cho, Namdo Kim, Hyuncheol Baik, Kyungkuk Kim, Dusung Kim, Jaebum Kim, Byeongun Min, Kyumyung Choi, Maciej J. Ciesielski, Seiyang Yang
A fast two-pass HDL simulation with on-demand dump. ASP-DAC (2008)
Sangkyum Kim, Jaebum Kim, Younhee Ko, Seung-won Hwang, Jiawei Han
PerRank: Personalized Rank Retrieval with Categorical and Numerical Attributes. WAIM (2008)
Jaebum Kim, Saurabh Sinha
Indelign: a probabilistic framework for annotation of insertions and deletions in a multiple alignment. Bioinform. 23 (3) (2007)
Jaebum Kim, J. Kim, Hyuncheol Park, B. Kim, S. Park
Modified enhanced max-log-maximum a posteriori algorithm using variable scaling factor. IET Commun. 1 (5) (2007)
Heesang Lee, Gyuseok Shim, Yun Bae Kim, Jinsoo Park, Jaebum Kim
A Search Ant and Labor Ant Algorithm for Clustering Data. ANTS Workshop (2006)
Jaebum Kim, Namshik Kim, Kumran Ji, Seungwon Kim, Hyuncheol Park
A new enhanced coding scheme for robust bit-stream of ATSC DTV. IEEE Trans. Consumer Electron. 51 (2) (2005)
Jaebum Kim, Namshik Kim, Kumran Ji, Seungwon Kim, Hyuncheol Park
Corrections to "A new enhanced coding scheme for robust bit-stream of ATSC DTV". IEEE Trans. Consumer Electron. 51 (4) (2005)
Yun Bae Kim, Chang Hun Lee, Jaebum Kim, Gyutai Kim, Jong Seon Hong
Empirical Analysis for Individual Behavior of Impatient Customers in a Call Center. AsiaSim (2004)
Dongkyu Kim, Jaebum Kim, Sang-goo Lee
Catalog Integration for Electronic Commerce through Category-Hierarchy Merging Technique. RIDE (2002)