Huai-Kuang Tsai

Publication Activity (10 Years)

Years Active: 2000-2023
Publications (10 Years): 5

Top Topics

Sequence Analysis

Top Venues

Briefings Bioinform.

Database J. Biol. Databases Curation

Nucleic Acids Res.

Publications

Yu-Hsin Chen, Kuan-Hao Chao, Jin Yung Wong, Chien-Fu Liu, Jun-Yi Leu, Huai-Kuang Tsai
A feature extraction free approach for protein interactome inference from co-elution data. Briefings Bioinform. 24 (4) (2023)
Kai-Li Chang, Jia-Hong Chen, Tzu-Chieh Lin, Jun-Yi Leu, Cheng-Fu Kao, Jin Yung Wong, Huai-Kuang Tsai
Short human eccDNAs are predictable from sequences. Briefings Bioinform. 24 (3) (2023)
Peng-Hsuan Li, Ting-Fu Chen, Jheng-Ying Yu, Shang-Hung Shih, Chan-Hung Su, Yin-Hung Lin, Huai-Kuang Tsai, Hsueh-Fen Juan, Chien-Yu Chen, Jia-Hsin Huang
pubmedKB: an interactive web server for exploring biomedical entity relations in the biomedical literature. Nucleic Acids Res. 50 (W1) (2022)
Cheng-Kai Shiau, Jia-Hsin Huang, Huai-Kuang Tsai
CATANA: a tool for generating comprehensive annotations of alternative transcript events. Bioinform. 35 (8) (2019)
I-Man Ng, Jia-Hsin Huang, Shang-Chi Tsai, Huai-Kuang Tsai
IsoPlot: a database for comparison of mRNA isoforms in fruit fly and mosquitoes. Database J. Biol. Databases Curation 2017 (2017)
Zing Tsung-Yeh Tsai, Shin-Han Shiu, Huai-Kuang Tsai
Contribution of Sequence Motif, Chromatin State, and DNA Structure Features to Predictive Models of Transcription Factor Binding in Yeast. PLoS Comput. Biol. 11 (8) (2015)
Chien-Hao Su, Tse-Yi Wang, Ming-Tsung Hsu, Francis Cheng-Hsuan Weng, Cheng-Yan Kao, Daryi Wang, Huai-Kuang Tsai
The Impact of Normalization and Phylogenetic Information on Estimating the Distance for Metagenomes. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (2) (2012)
Mei-Ju May Chen, Lih-Ching Chou, Tsung-Ting Hsieh, Ding-Dar Lee, Kai-Wei Liu, Chi-Yuan Yu, Yen-Jen Oyang, Huai-Kuang Tsai, Chien-Yu Chen
. Bioinform. 28 (5) (2012)
Zing Tsung-Yeh Tsai, Grace Tzu-Wei Huang, Huai-Kuang Tsai
Simultaneous Identification for Synergistic Transcription Factors and their Transcription Factor Binding Sites. CISIS (2011)
Chien-Hao Su, Ming-Tsung Hsu, Tse-Yi Wang, Sufeng Chiang, Jen-Hao Cheng, Francis C. Weng, Cheng-Yan Kao, Daryi Wang, Huai-Kuang Tsai
MetaABC - an integrated metagenomics platform for data adjustment, binning and clustering. Bioinform. 27 (16) (2011)
Tse-Yi Wang, Chien-Hao Su, Huai-Kuang Tsai
MetaRank: a rank conversion scheme for comparative analysis of microbial community compositions. Bioinform. 27 (24) (2011)
Francis C. Weng, Chien-Hao Su, Ming-Tsung Hsu, Tse-Yi Wang, Huai-Kuang Tsai, Daryi Wang
Reanalyze unassigned reads in Sanger based metagenomic data using conserved gene adjacency. BMC Bioinform. 11 (2010)
Yao-Lin Chang, Huai-Kuang Tsai, Cheng-Yan Kao, Yung-Chiang Chen, Yuh-Jyh Hu, Jinn-Moon Yang
Evolutionary conservation of DNA-contact residues in DNA-binding domains. BMC Bioinform. 9 (S-6) (2008)
Yao-Lin Chang, Huai-Kuang Tsai, Cheng-Yan Kao, Yung-Chiang Chen, Jinn-Moon Yang
Evolutionary Conservation of DNA-Contact residues in DNA-binding Domains. IMSCCS (2007)
Huai-Kuang Tsai, Meng-Yuan Chou, Ching Hua Shih, Grace Tzu-Wei Huang, Tien-Hsien Chang, Wen-Hsiung Li
MYBS: a comprehensive web server for mining transcription factor binding sites in yeast. Nucleic Acids Res. 35 (Web-Server-Issue) (2007)
Huai-Kuang Tsai, Grace Tzu-Wei Huang, Meng-Yuan Chou, Henry Horng-Shing Lu, Wen-Hsiung Li
Method for identifying transcription factor binding sites in yeast. Bioinform. 22 (14) (2006)
East Zhao, Hsuan-Liang Liu, Chi-Hung Tsai, Huai-Kuang Tsai, Chen-hsiung Chan, Cheng-Yan Kao
Cysteine separations profiles on protein sequences infer disulfide connectivity. Bioinform. 21 (8) (2005)
Chen-hsiung Chan, Sheng-An Lee, Cheng-Yan Kao, Huai-Kuang Tsai
Improving EAX with restricted 2-opt. GECCO (2005)
Han-Yu Chuang, Huai-Kuang Tsai, Cheng-Yan Kao
Optimal Designs for Microarray Experiments. ISPAN (2004)
Yu-Cheng Huang, Yu-Chih Chao, Shwu-Bin Lin, Huai-Kuang Tsai, Chun-Fan Chang, Sheng-An Lee, Cheng-Yan Kao
A Tool to Determine the Specificity of Antisense Oligonucleotide. METMBS (2004)
Huai-Kuang Tsai, Jinn-Moon Yang, Yuan-Fan Tsai, Cheng-Yan Kao
An Evolutionary Approach for Gene Expression Patterns. IEEE Trans. Inf. Technol. Biomed. 8 (2) (2004)
Chi-Hung Tsai, Huai-Kuang Tsai, Shih-Chieh Chen, Cheng-Yan Kao
Disulfide Connectivity Prediction Using Support Vector Machine and Novel Features. METMBS (2004)
Huai-Kuang Tsai, Jinn-Moon Yang, Yuan-Fan Tsai, Cheng-Yan Kao
Some issues of designing genetic algorithms for traveling salesman problems. Soft Comput. 8 (10) (2004)
Huai-Kuang Tsai, Jinn-Moon Yang, Yuan-Fang Tsai, Cheng-Yan Kao
An evolutionary algorithm for large traveling salesman problems. IEEE Trans. Syst. Man Cybern. Part B 34 (4) (2004)
Hua-Sheng Chiu, Han-Yu Chuang, Huai-Kuang Tsai, Tao-Wei Huang, Cheng-Yan Kao
Discovering Statistically Significant Clusters by Using Iterative Genetic Algorithms in Gene Expression Data. METMBS (2004)
Yu-Cheng Huang, Han-Yu Chuang, Huai-Kuang Tsai, Chun-Fan Chang, Cheng-Yan Kao
Designing Multiple-Use Primer Set for Multiplex PCR by Using Compact GAs. PPSN (2004)
Han-Yu Chuang, Huai-Kuang Tsai, Yuan-Fan Tsai, Cheng-Yan Kao
Ranking Genes for Discriminability on Microarray Data. J. Inf. Sci. Eng. 19 (6) (2003)
Huai-Kuang Tsai, Jinn-Moon Yang, Cheng-Yan Kao
Solving traveling salesman problems by combining global and local search mechanisms. IEEE Congress on Evolutionary Computation (2002)
Huai-Kuang Tsai, Jinn-Moon Yang, Cheng-Yan Kao
Applying Genetic Algorithms To Finding The Optimal Gene Order In Displaying The Microarray Data. GECCO (2002)
Huai-Kuang Tsai, Cheng-Yan Kao, Jinn-Moon Yang
A Genetic Algorithm for Physical Mapping Problems. GECCO (2000)