Cheng-Yan Kao

Publication Activity (10 Years)

Years Active: 1993-2013
Publications (10 Years): 0

Top Topics

Protein Interaction

Top Venues

Publications

Hsueh-Ting Chu, William W. L. Hsiao, Jen-Chih Chen, Tze-Jung Yeh, Mong-Hsun Tsai, Han Lin, Yen-Wenn Liu, Sheng-An Lee, Chaur-Chin Chen, Theresa Tsao, Cheng-Yan Kao
assembly of RNA-Seq with efficient chimera-detection. Bioinform. 29 (8) (2013)
Chia-Hung Liu, Tzu-Chi Chen, Chun-Houh Chen, Cheng-Yan Kao, Chi-Ying F. Huang
Differential network biology reveals a positive correlation between a novel protein-protein interaction and cancer cells migration. EMBC (2013)
Chia-Ping Shen, Chia-Hung Liu, Feng-Sheng Lin, Han Lin, Chi-Ying F. Huang, Cheng-Yan Kao, Feipei Lai, Jeng-Wei Lin
A Multiclass Classification Tool Using Cloud Computing Architecture. ASONAM (2012)
Chien-Hao Su, Tse-Yi Wang, Ming-Tsung Hsu, Francis Cheng-Hsuan Weng, Cheng-Yan Kao, Daryi Wang, Huai-Kuang Tsai
The Impact of Normalization and Phylogenetic Information on Estimating the Distance for Metagenomes. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (2) (2012)
Chien-Hsiang Hsu, Tse-Yi Wang, Hsueh-Ting Chu, Cheng-Yan Kao, Kuang-Chi Chen
A quantitative analysis of monochromaticity in genetic interaction networks. BMC Bioinform. 12 (S-13) (2011)
Chien-Hao Su, Ming-Tsung Hsu, Tse-Yi Wang, Sufeng Chiang, Jen-Hao Cheng, Francis C. Weng, Cheng-Yan Kao, Daryi Wang, Huai-Kuang Tsai
MetaABC - an integrated metagenomics platform for data adjustment, binning and clustering. Bioinform. 27 (16) (2011)
Sheng-An Lee, Theresa Tsao, Ko-Chun Yang, Han Lin, Yu-Lun Kuo, Chien-Hsiang Hsu, Wen-Kuei Lee, Kuo-Chuan Huang, Cheng-Yan Kao
Construction and analysis of the protein-protein interaction networks for schizophrenia, bipolar disorder, and major depression. BMC Bioinform. 12 (S-13) (2011)
Sheng-An Lee, Chen-hsiung Chan, Tzu-Chi Chen, Chia-Ying Yang, Kuo-Chuan Huang, Chi-Hung Tsai, Jin-Mei Lai, Feng-Sheng Wang, Cheng-Yan Kao, Chi-Ying F. Huang
POINeT: protein interactome with sub-network analysis and hub prioritization. BMC Bioinform. 10 (2009)
Un-Gian Iunn, Jia-hung Tai, Kiat-Gak Lau, Cheng-Yan Kao, Keh-Jiann Chen
Modeling Taiwanese POS Tagging Using Statistical Methods and Mandarin Training Data. Int. J. Comput. Linguistics Chin. Lang. Process. 14 (3) (2009)
Shun-Fu Chen, Yue-Li Juang, Wei-Kang Chou, Jin-Mei Lai, Chi-Ying F. Huang, Cheng-Yan Kao, Feng-Sheng Wang
Inferring a transcriptional regulatory network of the cytokinesis-related genes by network component analysis. BMC Syst. Biol. 3 (2009)
Tse-Yi Wang, Kuang-Chi Chen, D. Frank Hsu, Cheng-Yan Kao
Combining Agent-Based Models with Stochastic Differential Equations for Gene Regulatory Networks. BIBE (2009)
Sheng-An Lee, Chen-hsiung Chan, Chi-Hung Tsai, Jin-Mei Lai, Feng-Sheng Wang, Cheng-Yan Kao, Chi-Ying F. Huang
Ortholog-based protein-protein interaction prediction and its application to inter-species interactions. BMC Bioinform. 9 (S-12) (2008)
Yao-Lin Chang, I-Hsin Liu, Cheng-Yan Kao, Jinn-Moon Yang
Evolutionary Conservation and Interacting Preference for Identifying Protein-DNA Interactions. IMSCCS (2008)
Yao-Lin Chang, Huai-Kuang Tsai, Cheng-Yan Kao, Yung-Chiang Chen, Yuh-Jyh Hu, Jinn-Moon Yang
Evolutionary conservation of DNA-contact residues in DNA-binding domains. BMC Bioinform. 9 (S-6) (2008)
Yen-Hsi Lin, Zhao-Ming Gao, Cheng-Yan Kao
中文名詞組的辨識：監督式與半監督式學習法的實驗 (Chinese NP Chunking: Experiments with Supervised, and Semisupervised Learning) [In Chinese]. ROCLING (2008)
Un-Gian Iunn, Chia-Hung Tai, Kiat-Gak Lau, Keh-Jiann Chen, Cheng-Yan Kao
利用統計方法及中文訓練資料處理台語文詞性標記 (Modeling Taiwanese POS tagging with statistical methods and Mandarin training data) [In Chinese]. ROCLING (2008)
Un-Gian Iunn, Kiat-Gak Lau, Hong-Giau Tan-Tenn, Sheng-An Lee, Cheng-Yan Kao
Modeling Taiwanese Southern-Min Tone Sandhi Using Rule-Based Methods. Int. J. Comput. Linguistics Chin. Lang. Process. 12 (4) (2007)
Chun-Nan Hsu, Jin-Mei Lai, Chia-Hung Liu, Huei-Hun Tseng, Chih-Yun Lin, Kuan-Ting Lin, Hsu-Hua Yeh, Ting-Yi Sung, Wen-Lian Hsu, Li-Jen Su, Sheng-An Lee, Chang-Han Chen, Gen-Cher Lee, D. T. Lee, Yow-Ling Shiue, Chang-Wei Yeh, Chao-Hui Chang, Cheng-Yan Kao, Chi-Ying F. Huang
Detection of the inferred interaction network in hepatocellular carcinoma from EHCO (Encyclopedia of Hepatocellular Carcinoma genes Online). BMC Bioinform. 8 (2007)
Chia-Hung Chang, Yu-Chung Chang, Anthony Underwood, Chien-Shun Chiou, Cheng-Yan Kao
VNTRDB: a bacterial variable number tandem repeat locus database. Nucleic Acids Res. 35 (Database-Issue) (2007)
Yao-Lin Chang, Huai-Kuang Tsai, Cheng-Yan Kao, Yung-Chiang Chen, Jinn-Moon Yang
Evolutionary Conservation of DNA-Contact residues in DNA-binding Domains. IMSCCS (2007)
Chi-Way Wang, Lei-Ming Sun, Ming-Hui Jin, Chung-Jung Fu, Li Liu, Chen-hsiung Chan, Cheng-Yan Kao
A genetic algorithm for resident physician scheduling problem. GECCO (2007)
Tao-Wei Huang, Chung-Yen Lin, Cheng-Yan Kao
Reconstruction of human protein interolog network using evolutionary conserved network. BMC Bioinform. 8 (2007)
Tu-Bin Chu, Ming-Hui Jin, Li-Xin Xu, Jong-Tsong Chiang, Cheng-Yan Kao
Portable Patient Information Integration System for Patient Safety Improvement. ISPA Workshops (2007)
Tzu-Hsiang Chou, Ming-Hui Jin, Chi-Chung Chen, Cheng-Yan Kao
Positioning System in Taipei Children's Museum of Transportation and Communication. ISPA Workshops (2007)
Chaur-Chin Chen, Cheng-Yan Kao, Chun-Fan Chang, Hsueh-Ting Chu, Chiung-Nien Chen
Simple Software for Microarray Image Analysis. CRV (2006)
Pei-Ying Huang, Tzung-Pei Hong, Cheng-Yan Kao
Combining Single-pass and Multiple-pass Heuristics for Group Flexible Flow-shop Scheduling Problems. SMC (2006)
Ming-Hui Jin, D. Frank Hsu, Cheng-Yan Kao
Compact Genetic Algorithm for Performance Improvement in Hierarchical Sensor Networks Management. J. Interconnect. Networks 7 (1) (2006)
East Zhao, Hsuan-Liang Liu, Chi-Hung Tsai, Huai-Kuang Tsai, Chen-hsiung Chan, Cheng-Yan Kao
Cysteine separations profiles on protein sequences infer disulfide connectivity. Bioinform. 21 (8) (2005)
Un-Gian Iunn, Kiat-Gak Lau, Sheng-an Li, Cheng-Yan Kao
A Study on Implementation of Southern-Min Taiwanese Tone Sandhi System. PACLIC (2005)
Un-Gian Iunn, Sheng-an Li, Kiat-Gak Lau, Cheng-Yan Kao
台語變調系統實作研究 (A Study on Implementation of Taiwanese Tone Sandhi System) [In Chinese]. ROCLING (2005)
Yen-Chih Chen, Jinn-Moon Yang, Chi-Hung Tsai, Cheng-Yan Kao
GEMPLS: A New QSAR Method Combining Generic Evolutionary Method and Partial Least Squares. EvoWorkshops (2005)
Ming-Hui Jin, Cheng-Yan Kao, Yu-Cheng Huang, D. Frank Hsu, Ren-Guey Lee, Chih-Kung Lee
Compact genetic algorithm for active interval scheduling in hierarchical sensor networks. GECCO (2005)
Ming-Hui Jin, Ren-Guey Lee, Cheng-Yan Kao, You-Rui Wu, D. Frank Hsu, Tse-Ping Dong, Kuan-Tsae Huang
Sensor Network Design and Implementation for Health Telecare and Diagnosis Assistance Applications. ICPADS (2) (2005)
Chi-Hung Tsai, Bo-Juen Chen, Chen-hsiung Chan, Hsuan-Liang Liu, Cheng-Yan Kao
Improving disulfide connectivity prediction with sequential distance between oxidized cysteines. Bioinform. 21 (24) (2005)
Kuang-Chi Chen, Tse-Yi Wang, Huei-Hun Tseng, Chi-Ying F. Huang, Cheng-Yan Kao
. Bioinform. 21 (12) (2005)
Yu-Cheng Huang, Chun-Fan Chang, Chen-hsiung Chan, Tze-Jung Yeh, Ya-Chun Chang, Chaur-Chin Chen, Cheng-Yan Kao
Integrated minimum-set primers and unique probe design algorithms for differential detection on symptom-related pathogens. Bioinform. 21 (24) (2005)
Ming-Hui Jin, Win-Zing Li, D. Frank Hsu, Cheng-Yan Kao
Compact Genetic Algorithm for Performance Improvement in Hierarchical Sensor Networks Management. ISPAN (2005)
Chen-hsiung Chan, Sheng-An Lee, Cheng-Yan Kao, Huai-Kuang Tsai
Improving EAX with restricted 2-opt. GECCO (2005)
Han-Yu Chuang, Huai-Kuang Tsai, Cheng-Yan Kao
Optimal Designs for Microarray Experiments. ISPAN (2004)
Han-Yu Chuang, Hongfang Liu, Stuart M. Brown, Cameron McMunn-Coffran, Cheng-Yan Kao, D. Frank Hsu
Identifying Significant Genes from Microarray Data. BIBE (2004)
Yu-Cheng Huang, Yu-Chih Chao, Shwu-Bin Lin, Huai-Kuang Tsai, Chun-Fan Chang, Sheng-An Lee, Cheng-Yan Kao
A Tool to Determine the Specificity of Antisense Oligonucleotide. METMBS (2004)
Huai-Kuang Tsai, Jinn-Moon Yang, Yuan-Fan Tsai, Cheng-Yan Kao
An Evolutionary Approach for Gene Expression Patterns. IEEE Trans. Inf. Technol. Biomed. 8 (2) (2004)
Chi-Hung Tsai, Huai-Kuang Tsai, Shih-Chieh Chen, Cheng-Yan Kao
Disulfide Connectivity Prediction Using Support Vector Machine and Novel Features. METMBS (2004)
Huai-Kuang Tsai, Jinn-Moon Yang, Yuan-Fan Tsai, Cheng-Yan Kao
Some issues of designing genetic algorithms for traveling salesman problems. Soft Comput. 8 (10) (2004)
Huai-Kuang Tsai, Jinn-Moon Yang, Yuan-Fang Tsai, Cheng-Yan Kao
An evolutionary algorithm for large traveling salesman problems. IEEE Trans. Syst. Man Cybern. Part B 34 (4) (2004)
Tao-Wei Huang, An-Chi Tien, Wen-Shien Huang, Yuan-Chii G. Lee, Chin-Lin Peng, Huei-Hun Tseng, Cheng-Yan Kao, Chi-Ying F. Huang
POINT: a database for the prediction of protein-protein interactions based on the orthologous interactome. Bioinform. 20 (17) (2004)
Chia-Hung Chang, Han-Yu Chuang, Yi-Hung Chiang, Chien-Shun Chiou, Hsueh-I Lu, Cheng-Yan Kao
Automatically Predicting Possible Loci of Variable Number of Tandem Repeats. BIBE (2004)
Hua-Sheng Chiu, Han-Yu Chuang, Huai-Kuang Tsai, Tao-Wei Huang, Cheng-Yan Kao
Discovering Statistically Significant Clusters by Using Iterative Genetic Algorithms in Gene Expression Data. METMBS (2004)
Yen-Chih Chen, Jinn-Moon Yang, Chi-Hung Tsai, Cheng-Yan Kao
Comparative Molecular Binding Energy Analysis of HIV-1 Protease Inhibitors Using Genetic Algorithm-Based Partial Least Squares Method. GECCO (2) (2004)
Han-Yu Chuang, Hongfang Liu, Fang-An Chen, Cheng-Yan Kao, D. Frank Hsu
Combination Methods in Microarray Analysis. ISPAN (2004)
Chia-Wen Chang, Mao-Yen Chen, Wen-Chang Chang, Cheng-Yan Kao
Exploring of Radiation Resistance from Bacterium Deinococcus radiodurans R1 by Amino Acid Compositions of Proteins: View from Comparative Whole Protein Sequences. METMBS (2004)
Yu-Cheng Huang, Han-Yu Chuang, Huai-Kuang Tsai, Chun-Fan Chang, Cheng-Yan Kao
Designing Multiple-Use Primer Set for Multiplex PCR by Using Compact GAs. PPSN (2004)
Han-Yu Chuang, Huai-Kuang Tsai, Yuan-Fan Tsai, Cheng-Yan Kao
Ranking Genes for Discriminability on Microarray Data. J. Inf. Sci. Eng. 19 (6) (2003)
Hsien-Da Huang, Huei-Lin Chang, Tsung-Shan Tsou, Baw-Jhiune Liu, Cheng-Yan Kao, Jorng-Tzong Horng
A Data Mining Method to Predict Transcriptional Regulatory Sites Based on Differentially Expressed Genes in Human Genome. BIBE (2003)
Huai-Kuang Tsai, Jinn-Moon Yang, Cheng-Yan Kao
Solving traveling salesman problems by combining global and local search mechanisms. IEEE Congress on Evolutionary Computation (2002)
Huai-Kuang Tsai, Jinn-Moon Yang, Cheng-Yan Kao
Applying Genetic Algorithms To Finding The Optimal Gene Order In Displaying The Microarray Data. GECCO (2002)
Jinn-Moon Yang, Cheng-Yan Kao
A Robust Evolutionary Algorithm for Training Neural Networks. Neural Comput. Appl. 10 (3) (2001)
Jinn-Moon Yang, Jorng-Tzong Horng, Chih-Jen Lin, Cheng-Yan Kao
Optical Coating Designs Using the Family Competition Evolutionary Algorithm. Evol. Comput. 9 (4) (2001)
Hsien-Da Huang, Shu-Fen Fang, Jorng-Tzong Horng, Cheng-Yan Kao
Discovering Common Structural Motifs from SSU 16 S Ribosomal RNA Secondary Structures. BIBE (2001)
Jorng-Tzong Horng, Ching-Mei Lin, Bing-He Yang, Cheng-Yan Kao
A Genetic Algorithm for Multiple Sequence Alignment. German Conference on Bioinformatics (2001)
Jorng-Tzong Horng, Ying-Ping Chen, Cheng-Yan Kao
A Theoetical Aspect of a Stochastic Sketching Method for Global Optimization. J. Inf. Sci. Eng. 17 (1) (2001)
Jorng-Tzong Horng, Hsien-Da Huang, Cho-Chun Huang, Cheng-Yan Kao
Mining Putative Regulatory Elements in Gene Promoter Regions. German Conference on Bioinformatics (2001)
Jinn-Moon Yang, Jorng-Tzong Horng, Cheng-Yan Kao
Integrating adaptive mutations and family competition with differential evolution for flexible ligand docking. CEC (2001)
Jinn-Moon Yang, Cheng-Yan Kao
An Evolutionary Algorithms to Training Neural Networks for a Two-Spiral Problem. GECCO (2000)
Jinn-Moon Yang, Cheng-Yan Kao
Integrating adaptive mutations and family competition into genetic algorithms as function optimizer. Soft Comput. 4 (2) (2000)
Jorng-Tzong Horng, Yu-Jan Chang, Baw-Jhiune Liu, Cheng-Yan Kao
Materialized View Selection in a Data Warehouse Using Evolutionary Algorithms. GECCO (2000)
Jinn-Moon Yang, Jorng-Tzong Horng, Cheng-Yan Kao
A Genetic Algorithm with Adaptive Mutations and Family Competition for Training Neural Networks. Int. J. Neural Syst. 10 (5) (2000)
Huai-Kuang Tsai, Cheng-Yan Kao, Jinn-Moon Yang
A Genetic Algorithm for Physical Mapping Problems. GECCO (2000)
Jinn-Moon Yang, Cheng-Yan Kao
A family competition evolutionary algorithm for automated docking of flexible ligands to proteins. IEEE Trans. Inf. Technol. Biomed. 4 (3) (2000)
Jinn-Moon Yang, Cheng-Yan Kao
Flexible ligand docking using a robust evolutionary algorithm. J. Comput. Chem. 21 (11) (2000)
Jorng-Tzong Horng, Ching-Mei Lin, Baw-Jhiune Liu, Cheng-Yan Kao
Using Genetic Algorithms to Solve Multiple Sequence Alignments. GECCO (2000)
Ying-Ping Chen, Jorng-Tzong Horng, Cheng-Yan Kao
Stochastic sketching: a new method for global optimization. Soft Comput. 3 (2) (1999)
Jorng-Tzong Horng, Li-Yi Lin, Baw-Jhiune Liu, Cheng-Yan Kao
Resolution of simple plant location problems using an adapted genetic algorithm. CEC (1999)
Jorng-Tzong Horng, Yu-Jan Chang, Baw-Jhiune Liu, Cheng-Yan Kao
Materialized view selection using genetic algorithms in a data warehouse system. CEC (1999)
Jinn-Moon Yang, Jorng-Tzong Horng, Cheng-Yan Kao
A New Evolutionary Approach to Developing Neural Autonomous Agents. ICRA (1998)
Chien-Cheng Chen, Leuo-hong Wang, Cheng-Yan Kao, Ming Ouhyoung, Wen-Chin Chen
Molecular binding in structure-based drug design: a case study of the population-based annealing genetic algorithms. ICTAI (1998)
Jinn-Moon Yang, Cheng-Yan Kao
An Evolutionary Algorithm for Synthesizing Optical Thin-Film Designs. PPSN (1998)
Jinn-Moon Yang, Jorng-Tzong Horng, Cheng-Yan Kao
A Continuous Genetic Algorithm for Global Optimization. ICGA (1997)
Jinn-Moon Yang, Ying-Ping Chen, Jorng-Tzong Horng, Cheng-Yan Kao
Applying Family Competition to Evolution Strategies for Constrained Optimization. Evolutionary Programming (1997)
Jinn-Moon Yang, Cheng-Yan Kao
A Combined Evolutionary Algorithm for Real Parameters Optimization. International Conference on Evolutionary Computation (1996)
Jorng-Tzong Horng, Baw-Jhiune Liu, Cheng-Yan Kao
A Genetic Algorithm for Database Query Optimization. International Conference on Evolutionary Computation (1994)
Wen-Chih Huang, Cheng-Yan Kao, Jorng-Tzong Horng
A Genetic Algorithm Approach for Set Covering Problems. International Conference on Evolutionary Computation (1994)
Leuo-hong Wang, Cheng-Yan Kao, Ming Ouhyoung, Wen-Chin Chen
Using an Annealing Genetic Algorithm to Solve Global Energy Minimazation Problem. ICTAI (1994)
Feng-Tse Lin, Cheng-Yan Kao, Ching-Chi Hsu
Applying the genetic approach to simulated annealing in solving some NP-hard problems. IEEE Trans. Syst. Man Cybern. 23 (6) (1993)