Hongde Liu

Publication Activity (10 Years)

Years Active: 2004-2024
Publications (10 Years): 8

Top Topics

Human Genome Project

Transfer Learning

Sentiment Analysis

Annotation Tool

Top Venues

Briefings Bioinform.

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

Songhua Yang, Xinke Jiang, Hanjie Zhao, Wenxuan Zeng, Hongde Liu, Yuxiang Jia
FaiMA: Feature-aware In-context Learning for Multi-domain Aspect-based Sentiment Analysis. LREC/COLING (2024)
Songhua Yang, Xinke Jiang, Hanjie Zhao, Wenxuan Zeng, Hongde Liu, Yuxiang Jia
FaiMA: Feature-aware In-context Learning for Multi-domain Aspect-based Sentiment Analysis. CoRR (2024)
Hongjia Liu, Huamei Li, Amit Sharma, Wenjuan Huang, Duo Pan, Yu Gu, Lu Lin, Xiao Sun, Hongde Liu
scAnno: a deconvolution strategy-based automatic cell type annotation tool for single-cell RNA-sequencing data sets. Briefings Bioinform. 24 (3) (2023)
Wenlong Ming, Fuyu Li, Yanhui Zhu, Yunfei Bai, Wanjun Gu, Yun Liu, Xiao Sun, Xiaoan Liu, Hongde Liu
Predicting hormone receptors and PAM50 subtypes of breast cancer from multi-scale lesion images of DCE-MRI with transfer learning technique. Comput. Biol. Medicine 150 (2022)
Jing Meng, Brandon Victor, Zhen He, Hongde Liu, Taijiao Jiang
DeepSSV: detecting somatic small variants in paired tumor and normal sequencing data with convolutional neural network. Briefings Bioinform. 22 (4) (2021)
Jiahao Xie, Yiran Cai, Huamei Li, Jiahui Wu, Xinlei Zhao, Kun Luo, Amit Sharma, Jianming Xie, Xiao Sun, Hongde Liu
DNMHMM: An approach to identify the differential nucleosome regions in multiple cell types based on a Hidden Markov Model. Biosyst. 185 (2019)
Xiangfei Cheng, Yue Hou, Yumin Nie, Yiru Zhang, Huan Huang, Hongde Liu, Xiao Sun
Nucleosome Positioning of Intronless Genes in the Human Genome. IEEE ACM Trans. Comput. Biol. Bioinform. 15 (4) (2018)
Yue Hou, Huan Huang, Wenqiao Hu, Hongde Liu, Xiao Sun
Histone modifications influence skipped exons inclusion. J. Bioinform. Comput. Biol. 15 (1) (2017)
Xin Ma, Jing Guo, Hongde Liu, Jianming Xie, Xiao Sun
Sequence-Based Prediction of DNA-Binding Residues in Proteins with Conservation and Correlation Information. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (6) (2012)
Jiao Chen, ZuoLei Dai, Chang-Chang Cao, Qianqian Zhang, Hongde Liu, Xiao Sun
Next-generation sequencing data processing: Analysis of unmapped reads and extremely high mapped peaks. BMEI (2012)
Huan Huang, Shuangxin Yu, Hongde Liu, Xiao Sun
Nucleosome organization in sequences of alternative events in human genome. Biosyst. 109 (2) (2012)
Hongde Liu, Shuhai Lin, Zongwei Cai, Xiao Sun
Role of 10-11 bp periodicities of eukaryotic DNA sequence in nucleosome positioning. Biosyst. 105 (3) (2011)
Hongde Liu, Xiao Sun
Nucleosomes Are Well Positioned at Both Ends of Exons. LSMS/ICSEE (2010)
Xin Ma, Jiansheng Wu, Hongde Liu, Xinan Yang, Jianming Xie, Xiao Sun
SVM-Based Approach for Predicting DNA-Binding Residues in Proteins from Amino Acid Sequences. IJCBS (2009)
Jiansheng Wu, Hongde Liu, Xueye Duan, Yan Ding, Hongtao Wu, Yunfei Bai, Xiao Sun
Prediction of DNA-binding residues in proteins from amino acid sequences using a random forest model with a hybrid feature. Bioinform. 25 (1) (2009)
Jiansheng Wu, Hongtao Wu, Hongde Liu, Haoyan Zhou, Xiao Sun
Support Vector Machine for Prediction of DNA-Binding Domains in Protein-DNA Complexes. LSMS (2) (2007)
Xiaoquan Lu, Hongde Liu, Zhonghua Xue, Zhang Qiang
Maximum Spectrum of Continuous Wavelet Transform and Its Application in Resolving an Overlapped Signal. J. Chem. Inf. Model. 44 (4) (2004)